myRT

myRT report for GCA_902803635.1_Rumen_uncultured_genome_RUG14896

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Seq: CADCQU010000149.1 uncultured Lachnospiraceae bacterium isolate RUG14896 genome assembly, contig: RUG14896_asm_149, whole genome shotgun sequence (4690 bp)
Overview 1 RT 1: 3-4687 bp Neighborhood of RT #1 [3, 4687] RVT-UG26 RVT-UG26 scrB_fam Feature: gene Location: 3-146 bp Feature: gene Location: 115-1629 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 409-682 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 409-682 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 877-1225 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 877-1 225 bp Feature: gene Location: 2074-3531 bp Feature: domain Description: scrB_fam Location: 2137-3439 bp Feature: domain Description: scrB_fam Location: 21 37-3439 bp Feature: gene Location: 3923-4687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, scrB_fam (TIGR01322)

Seq: CADCQU010000199.1 uncultured Lachnospiraceae bacterium isolate RUG14896 genome assembly, contig: RUG14896_asm_199, whole genome shotgun sequence (6209 bp)
Overview 1 RT 1: 728-4168 bp Neighborhood of RT #1 [728, 4344] Csx1_III-U Csx1_III-U RVT-CRISPR clpP TraG_VirD4 Feature: gene Location: 728-988 bp Feature: domain Description: Csx1_III-U Location: 731-971 bp Feature: domain Description: Csx1_III-U Location: 731-971 bp Feature: gene Location: 1064-1846 bp Feature: domain Description: Csx1_III-U Location: 1112-1727 bp Feature: domain Description: Csx1_III-U Location: 1112 -172 7 bp Feature: gene Location: 1857-2162 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1884-2100 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1884-2 100 bp Feature: gene Location: 2354-2941 bp Feature: domain Description: clpP Location: 2372-2930 bp Feature: domain Description: clpP Location: 2 372 -2 930 bp Feature: gene Location: 3055-4344 bp Feature: domain Description: TraG_VirD4 Location: 3148-4168 bp Feature: domain Description: TraG_VirD4 Location: 3148-4168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx1_III-U (cl21570), RVT-CRISPR, clpP, TraG_VirD4