myRT

myRT report for GCA_902805735.1_AVDCRST-MAG68

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Seq: CADCTW010000027.1 uncultured Gemmatimonadetes bacterium isolate AVDCRST_MAG68 genome assembly, contig: NODE116, whole genome shotgun sequence (27694 bp)
Overview 1 RT 1: 17247-22671 bp Neighborhood of RT #1 [17247, 22671] RVT-UG12 Feature: gene Location: 17247-18233 bp Feature: gene Location: 18845-19159 bp Feature: gene Location: 19710-20666 bp Ori: CAA9300982.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 20070-20499 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 20070-20499 bp Feature: gene Location: 20738-20917 bp Feature: gene Location: 20914-22671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: CADCTW010000095.1 uncultured Gemmatimonadetes bacterium isolate AVDCRST_MAG68 genome assembly, contig: NODE21, whole genome shotgun sequence (55282 bp)
Overview 1 RT 1: 15469-22843 bp Neighborhood of RT #1 [15469, 22843] MhpC PQQ_2 PQQ_2 RVT-GII GIIM Beta-lactamase DUF3471 DUF3471 Feature: gene Location: 15469-17460 bp Feature: domain Description: MhpC Location: 16474-17134 bp Feature: domain Description: MhpC Location: 16474-17134 bp Feature: gene Location: 17472-18605 bp Ori: CAA9321609.1 Feature: domain Description: PQQ_2 Location: 17583-17895 bp Feature: domain Description: PQQ_2 Location: 17583-17895 bp Feature: domain Description: PQQ_2 Location: 17916-18567 bp Feature: domain Description: PQQ_2 Location: 17916-18567 bp Feature: gene Location: 19116-20477 bp Ori: CAA9321628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19434-20049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19434-2 0049 bp Feature: domain Description: GIIM Note: maturase Location: 20109-20322 bp Feature: domain Description: GIIM Note: maturase Location: 2 0109-2 032 2 bp Feature: gene Location: 20660-22303 bp Feature: domain Description: Beta-lactamase Location: 20777-21701 bp Feature: domain Description: Beta-lactamase Location: 2 0777-2 1701 bp Feature: domain Description: DUF3471 Location: 21773-21926 bp Feature: domain Description: DUF3471 Location: 2 1773-2 192 6 bp Feature: domain Description: DUF3471 Location: 22034-22259 bp Feature: domain Description: DUF3471 Location: 2 2 034-2 2 2 59 bp Feature: gene Location: 22436-22843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), PQQ_2 (pfam13360), RVT-GII, GIIM (pfam08388), Beta-lactamase (pfam00144), DUF3471 (pfam11954)