myRT

myRT report for GCA_902805745.1_AVDCRST-MAG94

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Seq: CADCTY010002290.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_884261, whole genome shotgun sequence (1247 bp)
Overview 1 RT 1: 2-1114 bp Neighborhood of RT #1 [2, 1128] RVT-GII GIIM InsA DDE_Tnp_IS1 Feature: gene Location: 2-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-1 31 bp Feature: domain Description: GIIM Note: maturase Location: 173-296 bp Feature: domain Description: GIIM Note: maturase Location: 1 73-296 bp Feature: gene Location: 378-668 bp Ori: CAA9415310.1 Feature: domain Description: InsA Location: 396-642 bp Feature: domain Description: InsA Location: 396-642 bp Feature: gene Location: 676-1128 bp Feature: domain Description: DDE_Tnp_IS1 Location: 736-1114 bp Feature: domain Description: DDE_Tnp_IS1 Location: 736-1 1 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: CADCTY010000504.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_136766, whole genome shotgun sequence (3154 bp)
Overview 1 RT 1: 1-1807 bp Neighborhood of RT #1 [1, 2790] EEP RVT-UNC Feature: gene Location: 1-2790 bp Feature: domain Description: EEP Location: 52-226 bp Feature: domain Description: EEP Location: 52 -2 2 6 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1186-1807 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1186-1807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EEP (cl00490), RVT-GII/RVT-CRISPR/RVT-UG2(RVT-UNC)

Seq: CADCTY010001832.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_686587, whole genome shotgun sequence (2166 bp)
Overview 1 RT 1: 149-2167 bp Neighborhood of RT #1 [149, 2166] InsB InsA RVT-GII Feature: gene Location: 149-403 bp Feature: domain Description: InsB Location: 155-362 bp Feature: domain Description: InsB Location: 155-3 62 bp Feature: gene Location: 481-840 bp Feature: domain Description: InsA Location: 484-763 bp Feature: domain Description: InsA Location: 484-763 bp Feature: gene Location: 1312-2166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsB (COG1662), InsA (COG3677), RVT-GII

Seq: CADCTY010001529.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_553839, whole genome shotgun sequence (6186 bp)
Overview 1 RT 1: 3-3125 bp Neighborhood of RT #1 [3, 3130] DDE_Tnp_IS1 RVT-GII YdfG ALDH_HMSADH_HapE Feature: gene Location: 3-185 bp Ori: CAA9374560.1 Feature: domain Description: DDE_Tnp_IS1 Location: 15-171 bp Feature: domain Description: DDE_Tnp_IS1 Location: 15-171 bp Feature: gene Location: 187-651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-538 bp Feature: gene Location: 797-1513 bp Feature: domain Description: YdfG Location: 806-1505 bp Feature: domain Description: YdfG Location: 806-1505 bp Feature: gene Location: 1601-3130 bp Feature: domain Description: ALDH_HMSADH_HapE Location: 1757-3125 bp Feature: domain Description: ALDH_HMSADH_HapE Location: 1757-3125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, YdfG (COG4221), ALDH_HMSADH_HapE (cd07115)

Seq: CADCTY010002371.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_936486, whole genome shotgun sequence (5902 bp)
Overview 1 RT 1: 170-5900 bp Neighborhood of RT #1 [170, 5900] RVT-GII GIIM DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 170-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1112 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1412 bp Feature: gene Location: 2023-5190 bp Feature: domain Description: DUF4158 Location: 2218-2701 bp Feature: domain Description: DUF415 8 Location: 2218-2701 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 3955-5116 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 395 5 -5 116 bp Feature: gene Location: 5295-5900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526)

Seq: CADCTY010000895.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_294617, whole genome shotgun sequence (4326 bp)
Overview 1 RT 1: 26-3974 bp Neighborhood of RT #1 [26, 3974] RVT_N RVT-GII GIIM HNH Feature: gene Location: 26-397 bp Feature: gene Location: 422-685 bp Feature: gene Location: 996-2747 bp Ori: CAA9346450.1 Feature: domain Description: RVT_N Location: 1029-1275 bp Feature: domain Description: RVT_N Location: 1029-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317-196 5 bp Feature: domain Description: GIIM Note: maturase Location: 2046-2277 bp Feature: domain Description: GIIM Note: maturase Location: 2046 -2277 bp Feature: domain Description: HNH Note: nucleases Location: 2484-2619 bp Feature: domain Description: HNH Note: nucleases Location: 2484-26 19 bp Feature: gene Location: 3411-3548 bp Feature: gene Location: 3612-3974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: CADCTY010001695.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_623681, whole genome shotgun sequence (4871 bp)
Overview 1 RT 1: 142-4802 bp Neighborhood of RT #1 [142, 4802] R1-I-EN RVT-CRISPR-like bZIP Feature: gene Location: 142-3702 bp Feature: domain Description: R1-I-EN Location: 436-1003 bp Feature: domain Description: R1-I-EN Location: 436-1003 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1909-2566 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1909-2566 bp Feature: gene Location: 3721-4560 bp Feature: domain Description: bZIP Location: 3799-3886 bp Feature: domain Description: bZIP Location: 37 99-3886 bp Feature: gene Location: 4674-4802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-CRISPR, bZIP (cl21462)

Seq: CADCTY010001208.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_430460, whole genome shotgun sequence (2631 bp)
Overview 1 RT 1: 953-2632 bp Neighborhood of RT #1 [953, 2631] NT_KNTase_like RVT-GII Feature: gene Location: 953-1477 bp Feature: gene Location: 1474-1848 bp Feature: domain Description: NT_KNTase_like Location: 1594-1828 bp Feature: domain Description: NT_KNTase_like Location: 1594-18 28 bp Feature: gene Location: 2344-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347-2632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347-2632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NT_KNTase_like (cd05403), RVT-GII

Seq: CADCTY010001501.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_541348, whole genome shotgun sequence (5755 bp)
Overview 1 RT 1: 2-5725 bp Neighborhood of RT #1 [2, 5725] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_NC-like Feature: gene Location: 2-1630 bp Feature: gene Location: 1630-3162 bp Feature: domain Description: retropepsin_like Location: 1714-1996 bp Feature: domain Description: retropepsin_like Location: 1714-19 9 6 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2752-2962 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2752-29 62 bp Feature: gene Location: 3159-5441 bp Ori: CAA9373459.1 Feature: domain Description: RNase_HI_RT_Ty3 Location: 3258-3630 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3258-3630 bp Feature: domain Description: Integrase_H2C2 Location: 4038-4200 bp Feature: domain Description: Integrase_H2C2 Location: 4038-4200 bp Feature: domain Description: rve Location: 4266-4602 bp Feature: domain Description: rve Location: 4266-4602 bp Feature: domain Description: CD_NC-like Location: 5148-5298 bp Feature: domain Description: CD_NC-like Location: 5148-529 8 bp Feature: gene Location: 5438-5725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG11/RVT-DGRs/RVT-UG26/RVT-UG17(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_NC-like (cd18980)

Seq: CADCTY010002401.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_954464, whole genome shotgun sequence (2774 bp)
Overview 1 RT 1: 29-2760 bp Neighborhood of RT #1 [29, 2774] RVT-GII RVT-GII GIIM RVT-GII Feature: gene Location: 29-307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-239 bp Feature: gene Location: 481-675 bp Feature: gene Location: 831-2561 bp Ori: CAA9420849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1830 bp Feature: domain Description: GIIM Note: maturase Location: 1899-2091 bp Feature: domain Description: GIIM Note: maturase Location: 1899-2091 bp Feature: gene Location: 2649-2774 bp Ori: CAA9420852.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2655-2760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2655-2760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CADCTY010001147.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_405225, whole genome shotgun sequence (3597 bp)
Overview 1 RT 1: 1902-3393 bp Neighborhood of RT #1 [1902, 3452] RVT-GII GIIM McrA Feature: gene Location: 1902-1991 bp Feature: gene Location: 2057-2383 bp Feature: gene Location: 2409-3452 bp Ori: CAA9359495.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412-2706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412-2706 bp Feature: domain Description: GIIM Note: maturase Location: 2784-3018 bp Feature: domain Description: GIIM Note: maturase Location: 2784-3018 bp Feature: domain Description: McrA Location: 3111-3393 bp Feature: domain Description: McrA Location: 311 1-3393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: CADCTY010000290.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1120753, whole genome shotgun sequence (2244 bp)
Overview 1 RT 1: 27-2141 bp Neighborhood of RT #1 [27, 2242] PolY_Pol_V_umuC RVT-GII GIIM HNHc Feature: gene Location: 27-1073 bp Ori: CAA9309126.1 Feature: domain Description: PolY_Pol_V_umuC Location: 63-984 bp Feature: domain Description: PolY_Pol_V_umuC Location: 63-984 bp Feature: gene Location: 1070-2242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1205-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 05-1472 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1757 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1757 bp Feature: domain Description: HNHc Note: nucleases Location: 1985-2141 bp Feature: domain Description: HNHc Note: nucleases Location: 1985-2141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PolY_Pol_V_umuC (cd01700), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CADCTY010000066.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1028774, whole genome shotgun sequence (4326 bp)
Overview 1 RT 1: 99-4239 bp Neighborhood of RT #1 [99, 4325] RVT_N RVT-GII RVT-GII GIIM McrA RVT-GII Intron_maturas2 HNHc Rve Feature: gene Location: 99-1607 bp Ori: CAA9298235.1 Feature: domain Description: RVT_N Location: 135-375 bp Feature: domain Description: RVT_N Location: 13 5-375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-1026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-1026 bp Feature: domain Description: GIIM Note: maturase Location: 1083-1266 bp Feature: domain Description: GIIM Note: maturase Location: 1083-1266 bp Feature: domain Description: McrA Location: 1281-1596 bp Feature: domain Description: McrA Location: 1281-1596 bp Feature: gene Location: 2016-2141 bp Feature: gene Location: 2166-3959 bp Ori: CAA9298256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2427-3222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2427-3222 bp Feature: domain Description: Intron_maturas2 Location: 3315-3594 bp Feature: domain Description: Intron_maturas2 Location: 3315-3594 bp Feature: domain Description: HNHc Note: nucleases Location: 3726-3822 bp Feature: domain Description: HNHc Note: nucleases Location: 3726-3822 bp Feature: gene Location: 4143-4325 bp Ori: CAA9298263.1 Feature: domain Description: Rve Location: 4146-4239 bp Feature: domain Description: Rve Location: 4146-4239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Intron_maturas2 (pfam01348), HNHc (smart00507), Rve (COG3316)

Seq: CADCTY010001767.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_654669, whole genome shotgun sequence (1394 bp)
Overview 1 RT 1: 371-1394 bp Neighborhood of RT #1 [371, 1393] RVT_N RVT-GII Feature: gene Location: 371-484 bp Feature: gene Location: 503-1393 bp Feature: domain Description: RVT_N Location: 545-791 bp Feature: domain Description: RVT_N Location: 545-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CADCTY010001671.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_614817, whole genome shotgun sequence (1112 bp)
Overview 1 RT 1: 1-1111 bp Neighborhood of RT #1 [1, 1110] RVT_N RVT-GII GIIM Feature: gene Location: 1-1110 bp Feature: domain Description: RVT_N Location: 4-139 bp Feature: domain Description: RVT_N Location: 4-139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-829 bp Feature: domain Description: GIIM Note: maturase Location: 907-1111 bp Feature: domain Description: GIIM Note: maturase Location: 907-1111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CADCTY010000451.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1195789, whole genome shotgun sequence (6366 bp)
Overview 1 RT 1: 1755-6365 bp Neighborhood of RT #1 [1755, 6365] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_CSD retropepsin_like RT_Rtv Feature: gene Location: 1755-1916 bp Feature: gene Location: 2021-2488 bp Feature: gene Location: 2676-5087 bp Ori: CAA9317827.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 2901-3072 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2901-3072 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3363-3717 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3363-3717 bp Feature: domain Description: Integrase_H2C2 Location: 3819-3987 bp Feature: domain Description: Integrase_H2C2 Location: 3819-3987 bp Feature: domain Description: rve Location: 4086-4395 bp Feature: domain Description: rve Location: 4086-4395 bp Feature: domain Description: CD_CSD Location: 4941-5076 bp Feature: domain Description: CD_CSD Location: 4941-5076 bp Feature: gene Location: 5108-6070 bp Feature: domain Description: retropepsin_like Location: 5258-5531 bp Feature: domain Description: retropepsin_like Location: 5258-5531 bp Feature: domain Description: RT_Rtv Location: 5903-6044 bp Feature: domain Description: RT_Rtv Location: 5903-6044 bp Feature: gene Location: 6084-6365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4/RVT-GII/RVT-DGRs/RVT-UG26(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_CSD (cl28914), retropepsin_like (cd00303), RT_Rtv (cd01645)

Seq: CADCTY010001013.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_347661, whole genome shotgun sequence (5302 bp)
Overview 1 RT 1: 2-4641 bp Neighborhood of RT #1 [2, 4664] RVT-GII RVT-GII GIIM KOG4768 RVT-GII GIIM McrA HTH_Tnp_4 DDE_Tnp_4 Feature: gene Location: 2-139 bp Feature: gene Location: 181-336 bp Feature: gene Location: 380-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-725 bp Feature: gene Location: 892-1017 bp Feature: gene Location: 1337-3013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1619-2303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1619-2303 bp Feature: domain Description: GIIM Note: maturase Location: 2372-2573 bp Feature: domain Description: GIIM Note: maturase Location: 2372-2573 bp Feature: domain Description: KOG4768 Location: 2846-2981 bp Feature: domain Description: KOG4768 Location: 2846-2981 bp Feature: gene Location: 3010-3759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3172-3337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317 2-3337 bp Feature: domain Description: GIIM Note: maturase Location: 3394-3586 bp Feature: domain Description: GIIM Note: maturase Location: 3394-3586 bp Feature: domain Description: McrA Location: 3586-3733 bp Feature: domain Description: McrA Location: 3586-3733 bp Feature: gene Location: 3835-4269 bp Feature: domain Description: HTH_Tnp_4 Location: 3976-4126 bp Feature: domain Description: HTH_Tnp_4 Location: 3976-4126 bp Feature: gene Location: 4296-4664 bp Ori: CAA9352427.1 Feature: domain Description: DDE_Tnp_4 Location: 4317-4641 bp Feature: domain Description: DDE_Tnp_4 Location: 4317 -4641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), McrA (COG4058), HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)

Seq: CADCTY010000415.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1180618, whole genome shotgun sequence (3371 bp)
Overview 1 RT 1: 81-3132 bp Neighborhood of RT #1 [81, 3164] LPLAT_MGAT-like RVT_N RVT-GII GIIM McrA Feature: gene Location: 81-788 bp Ori: CAA9315848.1 Feature: domain Description: LPLAT_MGAT-like Location: 363-765 bp Feature: domain Description: LPLAT_MGAT-like Location: 363-765 bp Feature: gene Location: 1305-1508 bp Feature: gene Location: 1512-3164 bp Ori: CAA9315900.1 Feature: domain Description: RVT_N Location: 1545-1791 bp Feature: domain Description: RVT_N Location: 1545-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833-2478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 33-2478 bp Feature: domain Description: GIIM Note: maturase Location: 2562-2793 bp Feature: domain Description: GIIM Note: maturase Location: 2562-2793 bp Feature: domain Description: McrA Location: 2835-3132 bp Feature: domain Description: McrA Location: 2835-3132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPLAT_MGAT-like (cd07987), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: CADCTY010000599.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_173126, whole genome shotgun sequence (6710 bp)
Overview 1 RT 1: 427-6002 bp Neighborhood of RT #1 [427, 6100] RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_CSD retropepsin_like RVT-UG11 AIR1 Feature: gene Location: 427-2346 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 430-709 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 430-709 bp Feature: domain Description: Integrase_H2C2 Location: 1039-1213 bp Feature: domain Description: Integrase_H2C2 Location: 1039-1213 bp Feature: domain Description: rve Location: 1264-1600 bp Feature: domain Description: rve Location: 1264-1600 bp Feature: domain Description: CD_CSD Location: 2152-2308 bp Feature: domain Description: CD_CSD Location: 2152-2308 bp Feature: gene Location: 2535-4523 bp Ori: CAA9327091.1 Feature: domain Description: retropepsin_like Location: 3105-3345 bp Feature: domain Description: retropepsin_like Location: 3105-3345 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4071-4329 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4071-4329 bp Feature: gene Location: 4529-6100 bp Feature: domain Description: AIR1 Location: 5876-6002 bp Feature: domain Description: AIR1 Location: 5876-6002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_CSD (cl28914), retropepsin_like (cd00303), RVT-UG11, AIR1 (COG5082)

Seq: CADCTY010000267.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_111214, whole genome shotgun sequence (9281 bp)
Overview 1 RT 1: 1-7184 bp Neighborhood of RT #1 [1, 7184] retropepsin_like Dcm RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve PHD_PHRF1 Feature: gene Location: 1-2268 bp Feature: domain Description: retropepsin_like Location: 328-598 bp Feature: domain Description: retropepsin_like Location: 328-598 bp Feature: domain Description: Dcm Location: 1021-1444 bp Feature: domain Description: Dcm Location: 1021-1444 bp Feature: gene Location: 2281-5412 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2947-3094 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2947-3094 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3412-3769 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3412-3769 bp Feature: domain Description: Integrase_H2C2 Location: 4114-4273 bp Feature: domain Description: Integrase_H2C2 Location: 4114-4273 bp Feature: domain Description: rve Location: 4327-4657 bp Feature: domain Description: rve Location: 4327-4657 bp Feature: domain Description: PHD_PHRF1 Location: 5239-5371 bp Feature: domain Description: PHD_PHRF1 Location: 5239-5371 bp Feature: gene Location: 5760-5891 bp Feature: gene Location: 6861-7184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), Dcm (COG0270), RVT-UG3/RVT-UG20/RVT-UG7/RVT-UG21(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), PHD_PHRF1 (cd15536)

Seq: CADCTY010000326.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1140080, whole genome shotgun sequence (2576 bp)
Overview 1 RT 1: 1-2574 bp Neighborhood of RT #1 [1, 2576] SnoaL_2 RVT-GII GIIM COG5500 Feature: gene Location: 1-231 bp Feature: domain Description: SnoaL_2 Location: 37-181 bp Feature: domain Description: SnoaL_2 Location: 37-181 bp Feature: gene Location: 258-419 bp Feature: gene Location: 884-2218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160-1781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160-1781 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2027 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2027 bp Feature: gene Location: 2460-2576 bp Ori: CAA9311315.1 Feature: domain Description: COG5500 Location: 2466-2574 bp Feature: domain Description: COG5500 Location: 2466-2574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_2 (pfam12680), RVT-GII, GIIM (pfam08388), COG5500 (Uncharacterized membrane protein )

Seq: CADCTY010002191.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_83532, whole genome shotgun sequence (1743 bp)
Overview 1 RT 1: 1-1679 bp Neighborhood of RT #1 [1, 1741] YhcG_C RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-177 bp Feature: domain Description: YhcG_C Location: 82-178 bp Feature: domain Description: YhcG_C Location: 82-178 bp Feature: gene Location: 182-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200-995 bp Feature: domain Description: Intron_maturas2 Location: 1097-1328 bp Feature: domain Description: Intron_maturas2 Location: 1097-1328 bp Feature: domain Description: HNHc Note: nucleases Location: 1493-1679 bp Feature: domain Description: HNHc Note: nucleases Location: 1493-1679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG_C, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CADCTY010000343.1 uncultured Leptolyngbya sp. isolate AVDCRST_MAG94 genome assembly, contig: k137_1148623, whole genome shotgun sequence (3114 bp)
Overview 1 RT 1: 2-1188 bp Neighborhood of RT #1 [2, 1292] RVT-GII HTH_23 HTH_33 DDE_3 Feature: gene Location: 2-196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-161 bp Feature: gene Location: 224-715 bp Feature: domain Description: HTH_23 Location: 302-449 bp Feature: domain Description: HTH_23 Location: 302-449 bp Feature: domain Description: HTH_33 Location: 557-707 bp Feature: domain Description: HTH_33 Location: 557-707 bp Feature: gene Location: 771-1292 bp Ori: CAA9312322.1 Feature: domain Description: DDE_3 Location: 780-1188 bp Feature: domain Description: DDE_3 Location: 780-1188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358)