myRT

myRT report for GCA_902806115.1_AVDCRST-MAG96

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Seq: CADCVN010001261.1 uncultured Segetibacter sp. isolate AVDCRST_MAG96 genome assembly, contig: k137_72791, whole genome shotgun sequence (1284 bp)
Overview 1 RT 1: 80-1160 bp Neighborhood of RT #1 [80, 1282] COG3415 DDE_3 RVT-GII Feature: gene Location: 80-505 bp Feature: domain Description: COG3415 Location: 83-467 bp Feature: domain Description: COG341 5 Location: 83-467 bp Feature: gene Location: 695-982 bp Feature: domain Description: DDE_3 Location: 710-914 bp Feature: domain Description: DDE_3 Location: 71 0-91 4 bp Feature: gene Location: 1064-1282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1070-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 070-1 1 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT-GII

Seq: CADCVN010001088.1 uncultured Segetibacter sp. isolate AVDCRST_MAG96 genome assembly, contig: k137_621091, whole genome shotgun sequence (1049 bp)
Overview 1 RT 1: 3-453 bp Neighborhood of RT #1 [3, 665] RT_LTR RVT-UNC Feature: gene Location: 3-167 bp Ori: CAA9517801.1 Feature: domain Description: RT_LTR Location: 9-162 bp Feature: domain Description: RT_LTR Location: 9-162 bp Feature: gene Location: 213-665 bp Ori: CAA9517810.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 300-453 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 300-453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_LTR (cd01647), RVT-UG11/RVT-UG26/RVT-DGRs/RVT-UG17(RVT-UNC)