myRT

myRT report for GCA_902806205.1_AVDCRST-MAG53

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Seq: CADCVR010000084.1 uncultured Solirubrobacteraceae bacterium isolate AVDCRST_MAG53 genome assembly, contig: NODE54, whole genome shotgun sequence (50369 bp)
Overview 1 RT 1: 18322-22213 bp Neighborhood of RT #1 [18322, 22213] GppA RVT-Retrons Feature: gene Location: 18322-19833 bp Feature: domain Description: GppA Location: 18340-19735 bp Feature: domain Description: GppA Location: 1 8340-1 9735 bp Feature: gene Location: 19949-20080 bp Feature: gene Location: 20084-21532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20579-21293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20579-21 293 bp Feature: gene Location: 21605-21847 bp Feature: gene Location: 21875-22213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GppA (COG0248), RVT-Retrons

Seq: CADCVR010000024.1 uncultured Solirubrobacteraceae bacterium isolate AVDCRST_MAG53 genome assembly, contig: NODE14, whole genome shotgun sequence (79753 bp)
Overview 1 RT 1: 75474-78981 bp Neighborhood of RT #1 [75474, 79202] WYL HTH_23 Tra8 Tra8 RVT-GII GIIM Feature: gene Location: 75474-76028 bp Feature: domain Description: WYL Location: 75489-75981 bp Feature: domain Description: WYL Location: 75489-75981 bp Feature: gene Location: 76048-77454 bp Feature: domain Description: HTH_23 Location: 76159-76243 bp Feature: domain Description: HTH_2 3 Location: 76159-762 43 bp Feature: domain Description: Tra8 Location: 76282-76543 bp Feature: domain Description: Tra8 Location: 762 82 -76543 bp Feature: domain Description: Tra8 Location: 76639-77353 bp Feature: domain Description: Tra8 Location: 76639-77353 bp Feature: gene Location: 77637-79202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78078-78696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78078-78696 bp Feature: domain Description: GIIM Note: maturase Location: 78762-78981 bp Feature: domain Description: GIIM Note: maturase Location: 78762 -78981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), HTH_23 (pfam13384), Tra8 (COG2826), RVT-GII, GIIM (pfam08388)