myRT

myRT report for GCA_902806695.1_methb

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Seq: CADCXN010000017.1 Methylobacter sp. B2 isolate METHB21 genome assembly, contig: METHB2_Contig_113, whole genome shotgun sequence (4807 bp)
Overview 1 RT 1: 2105-4010 bp Neighborhood of RT #1 [2105, 4072] RVT-GII LemA Feature: gene Location: 2105-2272 bp Feature: gene Location: 2584-2757 bp Feature: gene Location: 2857-3009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2908-3001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2908-3001 bp Feature: gene Location: 3440-4072 bp Feature: domain Description: LemA Location: 3455-4010 bp Feature: domain Description: LemA Location: 3455-401 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LemA (pfam04011)

Seq: CADCXN010000018.1 Methylobacter sp. B2 isolate METHB21 genome assembly, contig: METHB2_Contig_114, whole genome shotgun sequence (4469 bp)
Overview 1 RT 1: 1448-3327 bp Neighborhood of RT #1 [1448, 3371] RVT-GII SgaA_N_like Tam Feature: gene Location: 1448-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1454-1676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1454-1676 bp Feature: gene Location: 2129-2488 bp Feature: domain Description: SgaA_N_like Location: 2150-2453 bp Feature: domain Description: SgaA_N_like Location: 2 150-2 453 bp Feature: gene Location: 2622-3371 bp Feature: domain Description: Tam Location: 2637-3327 bp Feature: domain Description: Tam Location: 2 637-332 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SgaA_N_like (cd07247), Tam (COG4106)

Seq: CADCXN010000114.1 Methylobacter sp. B2 isolate METHB21 genome assembly, contig: METHB2_Contig_80, whole genome shotgun sequence (12608 bp)
Overview 1 RT 1: 5376-10983 bp Neighborhood of RT #1 [5376, 10985] INT_Rci_Hp1_C RVT-GII DDE_Tnp_1_3 Feature: gene Location: 5376-6158 bp Feature: gene Location: 6523-7653 bp Feature: domain Description: INT_Rci_Hp1_C Location: 7117-7591 bp Feature: domain Description: INT_Rci_Hp1_C Location: 7117-7591 bp Feature: gene Location: 9482-9763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9491-9758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9491-9758 bp Feature: gene Location: 10523-10696 bp Feature: gene Location: 10833-10985 bp Feature: domain Description: DDE_Tnp_1_3 Location: 10878-10983 bp Feature: domain Description: DDE_Tnp_1_3 Location: 10878-10983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT-GII

Seq: CADCXN010000063.1 Methylobacter sp. B2 isolate METHB21 genome assembly, contig: METHB2_Contig_34, whole genome shotgun sequence (39915 bp)
Overview 1 RT 1: 31481-33858 bp Neighborhood of RT #1 [31481, 33858] RVT-DGRs DUF1566 DUF1566 PEP-CTERM Feature: gene Location: 31481-31630 bp Feature: gene Location: 32359-32649 bp Feature: gene Location: 32919-33137 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32961-33135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32961-33135 bp Feature: gene Location: 33139-33669 bp Feature: domain Description: DUF1566 Location: 33142-33217 bp Feature: domain Description: DUF1566 Location: 3314 2-33217 bp Feature: domain Description: DUF1566 Location: 33436-33568 bp Feature: domain Description: DUF1566 Location: 334 36-33568 bp Feature: domain Description: PEP-CTERM Location: 33589-33655 bp Feature: domain Description: PEP-CTERM Location: 33589-33655 bp Feature: gene Location: 33703-33858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603), PEP-CTERM