myRT

myRT report for GCA_902807075.1_PBIO1944

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Seq: CADCYM010000005.1 Escherichia coli strain PBIO1944 genome assembly, contig: NODE_5_length_210678_cov_31.7101, whole genome shotgun sequence (210678 bp)
Overview 1 RT 1: 3140-11266 bp Neighborhood of RT #1 [3140, 11268] phage_tail_N Phage_fiber_2 Phage_fiber_2 Collar Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 3140-6211 bp Feature: domain Description: phage_tail_N Location: 3143-3542 bp Feature: domain Description: phage_tail_N Location: 31 43-3542 bp Feature: domain Description: Phage_fiber_2 Location: 4526-4646 bp Feature: domain Description: Phage_fiber_2 Location: 4526-4646 bp Feature: domain Description: Phage_fiber_2 Location: 4658-4778 bp Feature: domain Description: Phage_fiber_2 Location: 4658-4778 bp Feature: domain Description: Collar Location: 5534-5672 bp Feature: domain Description: Collar Location: 5534-5672 bp Feature: gene Location: 6211-6795 bp Feature: domain Description: Caudo_TAP Location: 6427-6784 bp Feature: domain Description: Caudo_TAP Location: 6427-6784 bp Feature: gene Location: 7240-8844 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7531-8122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7531 -81 22 bp Feature: domain Description: TIR_2 Location: 8449-8782 bp Feature: domain Description: TIR_2 Location: 8449-8782 bp Feature: gene Location: 9202-9462 bp Feature: domain Description: PRK10597 Location: 9205-9445 bp Feature: domain Description: PRK1 0597 Location: 9205-9445 bp Feature: gene Location: 9682-11268 bp Feature: domain Description: prfC Location: 9700-11266 bp Feature: domain Description: prfC Location: 9700-1 1 266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484), Caudo_TAP (pfam02413), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)

Seq: CADCYM010000018.1 Escherichia coli strain PBIO1944 genome assembly, contig: NODE_18_length_131229_cov_25.1444, whole genome shotgun sequence (131229 bp)
Overview 1 RT 1: 40304-44245 bp Neighborhood of RT #1 [40304, 44245] RVT-Retrons Feature: gene Location: 40304-40543 bp Feature: gene Location: 40850-41026 bp Feature: gene Location: 41099-42871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41258-41876 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 412 58-41876 bp Feature: gene Location: 42893-43060 bp Feature: gene Location: 43106-44245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons