myRT

myRT report for GCA_902807085.1_PBIO1941

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Seq: CADCYE010000011.1 Escherichia coli strain PBIO1941 genome assembly, contig: NODE_11_length_152061_cov_42.8821, whole genome shotgun sequence (152061 bp)
Overview 1 RT 1: 133838-137721 bp Neighborhood of RT #1 [133838, 137726] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 133838-134554 bp Feature: domain Description: rph Location: 133841-134549 bp Feature: domain Description: rph Location: 1 33841 -1 34549 bp Feature: gene Location: 134606-135262 bp Feature: domain Description: pyrE Location: 134624-135257 bp Feature: domain Description: pyrE Location: 1 34624-1 35257 bp Feature: gene Location: 135560-136519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135695-136244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 35695-1 36244 bp Feature: gene Location: 136565-137161 bp Feature: domain Description: slmA Location: 136571-137147 bp Feature: domain Description: slmA Location: 1 36571 -1 371 47 bp Feature: gene Location: 137268-137726 bp Feature: domain Description: dut Location: 137274-137721 bp Feature: domain Description: dut Location: 1 37274-1 37721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: CADCYE010000045.1 Escherichia coli strain PBIO1941 genome assembly, contig: NODE_45_length_18274_cov_42.8999, whole genome shotgun sequence (18274 bp)
Overview 1 RT 1: 12351-14839 bp Neighborhood of RT #1 [12351, 14904] RVT-GII group_II_RT_mat Inovirus_Gp2 Feature: gene Location: 12351-12524 bp Feature: gene Location: 12558-12866 bp Feature: gene Location: 12853-13530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12967-13519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 967-13519 bp Feature: gene Location: 13548-14015 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13608-13914 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13608-13914 bp Feature: gene Location: 14341-14904 bp Feature: domain Description: Inovirus_Gp2 Location: 14398-14839 bp Feature: domain Description: Inovirus_Gp2 Location: 14398-14839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), Inovirus_Gp2 (pfam11726)

Seq: CADCYE010000071.1 Escherichia coli strain PBIO1941 genome assembly, contig: NODE_71_length_3465_cov_29.3286, whole genome shotgun sequence (3465 bp)
Overview 1 RT 1: 1864-2927 bp Neighborhood of RT #1 [1864, 3463] RVT-UG17 Feature: gene Location: 1864-2058 bp Feature: gene Location: 2202-2336 bp Feature: gene Location: 2444-3463 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2450-2927 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2450-2927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17