myRT

myRT report for GCA_902807115.1_PBIO1945

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Seq: CADCYQ010000002.1 Escherichia coli strain PBIO1945 genome assembly, contig: NODE_2_length_319863_cov_18.6702, whole genome shotgun sequence (319863 bp)
Overview 1 RT 1: 315646-319852 bp Neighborhood of RT #1 [315646, 319860] AAA_15 RVT-Retrons Feature: gene Location: 315646-315951 bp Feature: gene Location: 316834-319110 bp Feature: domain Description: AAA_15 Location: 316873-317875 bp Feature: domain Description: AAA_1 5 Location: 31 6873-31 7875 bp Feature: gene Location: 319225-319860 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 319408-319852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 9408-31 9852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: CADCYQ010000047.1 Escherichia coli strain PBIO1945 genome assembly, contig: NODE_47_length_19050_cov_20.3076, whole genome shotgun sequence (19050 bp)
Overview 1 RT 1: 12671-16653 bp Neighborhood of RT #1 [12671, 16679] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 12671-13702 bp Feature: domain Description: Asparaginase_2 Location: 12761-13694 bp Feature: domain Description: Asparaginase_2 Location: 12 761-13694 bp Feature: gene Location: 14029-14178 bp Feature: gene Location: 14226-14672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14532-14634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14532 -14634 bp Feature: gene Location: 14894-15265 bp Feature: gene Location: 15318-16679 bp Feature: domain Description: DcuC Location: 15321-16653 bp Feature: domain Description: DcuC Location: 1532 1-16653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)