myRT

myRT report for GCA_902807215.1_PBIO712

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Seq: CADCYH010000004.1 Pseudomonas aeruginosa strain PBIO712 genome assembly, contig: contig00004, whole genome shotgun sequence (449468 bp)
Overview 1 RT 1: 367585-377891 bp Neighborhood of RT #1 [367585, 377893] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 367585-368706 bp Feature: domain Description: COG3177 Location: 367603-368695 bp Feature: domain Description: COG31 77 Location: 367603-368695 bp Feature: gene Location: 368965-369102 bp Feature: gene Location: 369430-371115 bp Feature: RT Description: RVT_N Location: 369487-369727 bp Feature: RT Description: RVT_N Location: 369487-369727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369775-370411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369775-37041 1 bp Feature: domain Description: GIIM Note: maturase Location: 370465-370696 bp Feature: domain Description: GIIM Note: maturase Location: 370465-370696 bp Feature: domain Description: HNH Note: nucleases Location: 370948-371086 bp Feature: domain Description: HNH Note: nucleases Location: 370948-371 086 bp Feature: gene Location: 372196-375933 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 372304-372961 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 372304-372961 bp Feature: domain Description: PRK09776 Location: 373174-373645 bp Feature: domain Description: PRK09776 Location: 3731 74-373645 bp Feature: domain Description: PAS Location: 373702-374227 bp Feature: domain Description: PAS Location: 373702-374227 bp Feature: domain Description: PRK10060 Location: 374236-375883 bp Feature: domain Description: PRK1 0060 Location: 374236-375883 bp Feature: gene Location: 376040-377893 bp Feature: domain Description: PRK05658 Location: 376052-377891 bp Feature: domain Description: PRK05658 Location: 376052-377891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)