myRT

myRT report for GCA_902810755.1_dehalococcoidetesb101

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Seq: CADDYT010000055.1 Chloroflexi bacterium isolate 11 genome assembly, contig: NODE_565_length_38286_cov_79.566419, whole genome shotgun sequence (38286 bp)
Overview 1 RT 1: 9363-14621 bp Neighborhood of RT #1 [9363, 14653] Acetyltransf_1 RVT-GII Intron_maturas2 HNHc SnoaL Feature: gene Location: 9363-9500 bp Feature: gene Location: 9513-10397 bp Feature: domain Description: Acetyltransf_1 Location: 9585-9879 bp Feature: domain Description: Acetyltransf_1 Location: 9585-9879 bp Feature: gene Location: 11271-13154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11559-12369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 559-1 2369 bp Feature: domain Description: Intron_maturas2 Location: 12465-12741 bp Feature: domain Description: Intron_maturas2 Location: 1 2465-1 2741 bp Feature: domain Description: HNHc Note: nucleases Location: 12906-13053 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2906-1 3053 bp Feature: gene Location: 13177-13665 bp Feature: gene Location: 14222-14653 bp Feature: domain Description: SnoaL Location: 14252-14621 bp Feature: domain Description: SnoaL Location: 1 4252-1 4621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SnoaL (pfam07366), Acetyltransf_1 (pfam00583)

Seq: CADDYT010000062.1 Chloroflexi bacterium isolate 11 genome assembly, contig: NODE_628_length_36208_cov_73.570356, whole genome shotgun sequence (36208 bp)
Overview 1 RT 1: 558-6507 bp Neighborhood of RT #1 [558, 6507] cas1_CYANO cas4 RVT_N RVT-GII group_II_RT_mat Prok-JAB ThiF Feature: gene Location: 558-1541 bp Feature: domain Description: cas1_CYANO Location: 567-1539 bp Feature: domain Description: cas1_CYANO Location: 567-1539 bp Feature: gene Location: 1655-2275 bp Feature: domain Description: cas4 Location: 1685-2231 bp Feature: domain Description: cas4 Location: 1685-2 2 31 bp Feature: gene Location: 2457-3971 bp Feature: RT Description: RVT_N Location: 2532-2766 bp Feature: RT Description: RVT_N Location: 2 532 -2 766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2826-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 6-3468 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3615-3843 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3615-3843 bp Feature: gene Location: 4174-5688 bp Feature: domain Description: Prok-JAB Location: 4333-4714 bp Feature: domain Description: Prok-JAB Location: 4333-4714 bp Feature: domain Description: ThiF Location: 4924-5671 bp Feature: domain Description: ThiF Location: 492 4-5671 bp Feature: gene Location: 5818-6507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas4 (TIGR00372), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), Prok-JAB (pfam14464), ThiF (pfam00899), cas1_CYANO (TIGR04093)

Seq: CADDYT010000085.1 Chloroflexi bacterium isolate 11 genome assembly, contig: NODE_1128_length_25545_cov_63.777953, whole genome shotgun sequence (25545 bp)
Overview 1 RT 1: 16642-25542 bp Neighborhood of RT #1 [16642, 25542] Spo0J SF2_C_SNF RVT_N RVT-GII YkfC HNHc Feature: gene Location: 16642-17691 bp Feature: domain Description: Spo0J Location: 16825-17356 bp Feature: domain Description: Spo0J Location: 16825-173 56 bp Feature: gene Location: 17940-20039 bp Feature: domain Description: SF2_C_SNF Location: 18936-19152 bp Feature: domain Description: SF2_C_SNF Location: 1893 6-19152 bp Feature: gene Location: 19999-21687 bp Feature: RT Description: RVT_N Location: 20050-20293 bp Feature: RT Description: RVT_N Location: 20050-20293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20338-20974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203 3 8-20974 bp Feature: domain Description: YkfC Location: 21112-21286 bp Feature: domain Description: YkfC Location: 21112-21286 bp Feature: domain Description: HNHc Note: nucleases Location: 21472-21631 bp Feature: domain Description: HNHc Note: nucleases Location: 21472-2163 1 bp Feature: gene Location: 21709-21852 bp Feature: gene Location: 22285-25542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spo0J (COG1475), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)