myRT

myRT report for GCA_902812475.1_actinobacteriumb24

Download annotations/find similar RTs

Seq: CADDZP010000124.1 Actinobacteria bacterium isolate 24 genome assembly, contig: NODE_5759_length_9143_cov_8.677130, whole genome shotgun sequence (9143 bp)
Overview 1 RT 1: 874-4444 bp Neighborhood of RT #1 [874, 6132] Tra5 RVT-GII GIIM RHH_1 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 874-1116 bp Feature: gene Location: 1258-1995 bp Feature: domain Description: Tra5 Location: 1384-1828 bp Feature: domain Description: Tra5 Location: 1 384-1 828 bp Feature: gene Location: 1997-3208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2459-2759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2459-2759 bp Feature: domain Description: GIIM Note: maturase Location: 2834-3062 bp Feature: domain Description: GIIM Note: maturase Location: 2834-3062 bp Feature: gene Location: 2864-3196 bp Feature: domain Description: RHH_1 Location: 3071-3182 bp Feature: domain Description: RHH_1 Location: 3071 -31 82 bp Feature: gene Location: 3313-6132 bp Feature: domain Description: Resolvase Location: 3325-3766 bp Feature: domain Description: Resolvase Location: 3325-3766 bp Feature: domain Description: Recombinase Location: 3853-4216 bp Feature: domain Description: Recombinase Location: 3853-421 6 bp Feature: domain Description: Zn_ribbon_recom Location: 4255-4444 bp Feature: domain Description: Zn_ribbon_recom Location: 4255-4444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), RHH_1 (pfam01402), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)