myRT

myRT report for GCA_902825395.1_Q1465

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Seq: CADEAW010000032.1 Mycobacterium persicum strain CSURQ1465 genome assembly, contig: contig00032, whole genome shotgun sequence (58954 bp)
Overview 1 RT 1: 583-7985 bp Neighborhood of RT #1 [583, 8011] T7SS_ESX_EspC RVT-GII GIIM STKc_PknB_like Kelch Kelch Kelch Kelch_1 Kelch Penicillinase_R Feature: gene Location: 583-900 bp Feature: domain Description: T7SS_ESX_EspC Location: 586-871 bp Feature: domain Description: T7SS_ESX_EspC Location: 586-871 bp Feature: gene Location: 973-1602 bp Feature: gene Location: 2444-3706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660-3320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660-3320 bp Feature: domain Description: GIIM Note: maturase Location: 3404-3632 bp Feature: domain Description: GIIM Note: maturase Location: 3404-3632 bp Feature: gene Location: 4108-7377 bp Feature: domain Description: STKc_PknB_like Location: 4207-4978 bp Feature: domain Description: STKc_PknB_like Location: 4207-4978 bp Feature: domain Description: Kelch Location: 5650-5962 bp Feature: domain Description: Kelch Location: 5650-5962 bp Feature: domain Description: Kelch Location: 5974-6385 bp Feature: domain Description: Kelch Location: 5974-6385 bp Feature: domain Description: Kelch Location: 6394-6772 bp Feature: domain Description: Kelch Location: 6394-6772 bp Feature: domain Description: Kelch_1 Location: 6841-6970 bp Feature: domain Description: Kelch_1 Location: 6841 -6970 bp Feature: domain Description: Kelch Location: 6979-7369 bp Feature: domain Description: Kelch Location: 6979-7369 bp Feature: gene Location: 7637-8011 bp Feature: domain Description: Penicillinase_R Location: 7658-7985 bp Feature: domain Description: Penicillinase_R Location: 7658-7985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T7SS_ESX_EspC (pfam10824), RVT-GII, GIIM (pfam08388), STKc_PknB_like (cd14014), Kelch (smart00612), Kelch_1 (pfam01344), Penicillinase_R (pfam03965)

Seq: CADEAW010000092.1 Mycobacterium persicum strain CSURQ1465 genome assembly, contig: contig00092, whole genome shotgun sequence (30737 bp)
Overview 1 RT 1: 22355-30090 bp Neighborhood of RT #1 [22355, 30090] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 22355-24802 bp Feature: domain Description: PRK03381 Location: 22385-24746 bp Feature: domain Description: PRK03381 Location: 2 2 385-2 4746 bp Feature: gene Location: 24816-26537 bp Feature: domain Description: SSL2 Location: 24855-26235 bp Feature: domain Description: SSL2 Location: 2 4855-2 62 35 bp Feature: gene Location: 27392-28765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27743-28367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7743-2 8367 bp Feature: domain Description: GIIM Note: maturase Location: 28460-28673 bp Feature: domain Description: GIIM Note: maturase Location: 2 8460-2 8673 bp Feature: gene Location: 29097-29825 bp Feature: domain Description: Germane Location: 29142-29484 bp Feature: domain Description: Germane Location: 2 9142 -2 9484 bp Feature: domain Description: Gmad2 Location: 29535-29790 bp Feature: domain Description: Gmad2 Location: 2 9535-2 9790 bp Feature: gene Location: 29929-30090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: CADEAW010000208.1 Mycobacterium persicum strain CSURQ1465 genome assembly, contig: contig00208, whole genome shotgun sequence (2990 bp)
Overview 1 RT 1: 3-2325 bp Neighborhood of RT #1 [3, 2325] PRK06526 RVT-GII GIIM Feature: gene Location: 3-509 bp Feature: domain Description: PRK06526 Location: 60-498 bp Feature: domain Description: PRK06526 Location: 60-498 bp Feature: gene Location: 654-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-798 bp Feature: domain Description: GIIM Note: maturase Location: 867-978 bp Feature: domain Description: GIIM Note: maturase Location: 867-978 bp Feature: gene Location: 1515-2039 bp Feature: gene Location: 2188-2325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, GIIM (pfam08388)