myRT

myRT report for GCA_902825465.1_P8574

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Seq: CADEBE010000001.1 Bacteroides sp. Marseille-P8574 genome assembly, contig: contig00001, whole genome shotgun sequence (2880019 bp)
Overview 1 RT 1: 1837822-1841801 bp 2 RT 2: 2542568-2546517 bp Neighborhood of RT #1 [1837822, 1841801] MobC Toprim_2 RVT-GII Intron_maturas2 Neighborhood of RT #2 [2542568, 2546517] RVT-DGRs Feature: gene Location: 1837822-1838205 bp Feature: domain Description: MobC Location: 1838038-1838167 bp Feature: domain Description: MobC Location: 1 838038-1 8381 67 bp Feature: gene Location: 1838353-1839291 bp Feature: domain Description: Toprim_2 Location: 1838905-1839184 bp Feature: domain Description: Toprim_2 Location: 1 838905-1 8391 84 bp Feature: gene Location: 1839263-1841071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1839527-1840349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 839527-1 840349 bp Feature: domain Description: Intron_maturas2 Location: 1840418-1840727 bp Feature: domain Description: Intron_maturas2 Location: 1 84041 8-1 840727 bp Feature: gene Location: 1841360-1841503 bp Feature: gene Location: 1841619-1841801 bp Feature: gene Location: 2542568-2542858 bp Feature: gene Location: 2542868-2544229 bp Feature: gene Location: 2544562-2545749 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2544895-2545522 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2544895-2545522 bp Feature: gene Location: 2545712-2546140 bp Feature: gene Location: 2546137-2546517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), RVT-DGRs

Seq: CADEBE010000002.1 Bacteroides sp. Marseille-P8574 genome assembly, contig: contig00002, whole genome shotgun sequence (1900130 bp)
Overview 1 RT 1: 677816-679846 bp 2 RT 2: 720599-725556 bp 3 RT 3: 853758-857759 bp Neighborhood of RT #1 [677816, 679846] RVT-DGRs Neighborhood of RT #2 [720599, 725570] Mob_Pre Toprim_2 RVT-GII Intron_maturas2 dnaG Neighborhood of RT #3 [853758, 857764] Bac_Flav_CT_N RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_N TraO Feature: gene Location: 677816-678019 bp Feature: gene Location: 678059-678241 bp Feature: gene Location: 678303-679118 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 678636-678963 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 678636-678963 bp Feature: gene Location: 679084-679314 bp Feature: gene Location: 679352-679846 bp Feature: gene Location: 720599-721999 bp Feature: domain Description: Mob_Pre Location: 720659-721289 bp Feature: domain Description: Mob_Pre Location: 72 0659-72 12 89 bp Feature: gene Location: 722128-723060 bp Feature: domain Description: Toprim_2 Location: 722677-722950 bp Feature: domain Description: Toprim_2 Location: 72 2 677-72 2 950 bp Feature: gene Location: 723032-724840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723296-724118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 32 96-72 4118 bp Feature: domain Description: Intron_maturas2 Location: 724187-724496 bp Feature: domain Description: Intron_maturas2 Location: 72 4187-72 4496 bp Feature: gene Location: 725129-725272 bp Feature: gene Location: 725388-725570 bp Feature: domain Description: dnaG Location: 725457-725556 bp Feature: domain Description: dnaG Location: 72 5457-72 5556 bp Feature: gene Location: 853758-853958 bp Feature: domain Description: Bac_Flav_CT_N Location: 853761-853938 bp Feature: domain Description: Bac_Flav_CT_N Location: 853761-853938 bp Feature: gene Location: 853997-854473 bp Feature: gene Location: 854500-856308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854764-855586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854764-855586 bp Feature: domain Description: Intron_maturas2 Location: 855745-855967 bp Feature: domain Description: Intron_maturas2 Location: 855745-855967 bp Feature: domain Description: HNHc Note: nucleases Location: 856129-856282 bp Feature: domain Description: HNHc Note: nucleases Location: 85612 9-8562 82 bp Feature: gene Location: 856298-857179 bp Feature: domain Description: Bac_Flav_CT_N Location: 856421-857159 bp Feature: domain Description: Bac_Flav_CT_N Location: 85642 1-857159 bp Feature: gene Location: 857183-857764 bp Feature: domain Description: TraO Location: 857261-857759 bp Feature: domain Description: TraO Location: 8572 61-857759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Mob_Pre (pfam01076), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), dnaG (TIGR01391), Bac_Flav_CT_N (TIGR03780), HNHc (smart00507), TraO (pfam10626)