myRT

myRT report for GCA_902826335.1_RBC055

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Seq: CADEEL010000015.1 uncultured Alphaproteobacteria bacterium isolate Alphaproteobacteria sp. RBC055 genome assembly, contig: MAG055_15, whole genome shotgun sequence (73083 bp)
Overview 1 RT 1: 42447-46025 bp Neighborhood of RT #1 [42447, 46042] PRK05174 RVT-Retrons COG3636 upstrm_HI1419 Feature: gene Location: 42447-42989 bp Feature: domain Description: PRK05174 Location: 42477-42966 bp Feature: domain Description: PRK051 74 Location: 42477-42966 bp Feature: gene Location: 43195-43671 bp Feature: gene Location: 43766-45100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44228-44849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44228-44849 bp Feature: gene Location: 45453-45740 bp Feature: domain Description: COG3636 Location: 45462-45732 bp Feature: domain Description: COG3636 Location: 45462-45732 bp Feature: gene Location: 45737-46042 bp Feature: domain Description: upstrm_HI1419 Location: 45749-46025 bp Feature: domain Description: upstrm_HI1 41 9 Location: 45749-46025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05174 (bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase), RVT-Retrons, COG3636 (DNA-binding prophage protein ), upstrm_HI1419 (TIGR02683)

Seq: CADEEL010000033.1 uncultured Alphaproteobacteria bacterium isolate Alphaproteobacteria sp. RBC055 genome assembly, contig: MAG055_33, whole genome shotgun sequence (29370 bp)
Overview 1 RT 1: 23381-29069 bp Neighborhood of RT #1 [23381, 29314] pimC_large RVT-Retrons TIR_2 pimD_small PepSY_TM Feature: gene Location: 23381-23674 bp Feature: gene Location: 23758-24954 bp Feature: domain Description: pimC_large Location: 23767-24952 bp Feature: domain Description: pimC_large Location: 2 3767-2 4952 bp Feature: gene Location: 25161-26807 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25335-25944 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 5335-2 5944 bp Feature: domain Description: TIR_2 Location: 26286-26592 bp Feature: domain Description: TIR_2 Location: 2 62 86-2 6592 bp Feature: gene Location: 26875-28011 bp Feature: domain Description: pimD_small Location: 26881-27991 bp Feature: domain Description: pimD_small Location: 2 6881-2 7991 bp Feature: gene Location: 28022-29314 bp Feature: domain Description: PepSY_TM Location: 28064-29069 bp Feature: domain Description: PepSY_TM Location: 2 8064-2 9069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pimC_large (TIGR03204), RVT-Retrons, TIR_2 (pfam13676), pimD_small (TIGR03203), PepSY_TM (pfam03929)