myRT

myRT report for GCA_902826615.1_RBC101

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Seq: CADEFN010000025.1 uncultured Gemmatimonadetes bacterium isolate Gemmatimonadetes sp. RBC101 genome assembly, contig: MAG101_25, whole genome shotgun sequence (7490 bp)
Overview 1 RT 1: 2725-7182 bp Neighborhood of RT #1 [2725, 7193] nitrilase RVT-UG5 CadC1 TPR TPR SRPBCC_CalC_Aha1-like_GntR-HTH Feature: gene Location: 2725-3795 bp Feature: domain Description: nitrilase Location: 3340-3568 bp Feature: domain Description: nitrilase Location: 3340-3568 bp Feature: gene Location: 3834-3989 bp Feature: gene Location: 4010-5731 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4445-4925 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4445-4925 bp Feature: gene Location: 5937-6743 bp Feature: domain Description: CadC1 Location: 5955-6261 bp Feature: domain Description: CadC1 Location: 5955-6261 bp Feature: domain Description: TPR Location: 6291-6447 bp Feature: domain Description: TPR Location: 6291 -6447 bp Feature: domain Description: TPR Location: 6498-6672 bp Feature: domain Description: TPR Location: 6498-6672 bp Feature: gene Location: 6759-7193 bp Feature: domain Description: SRPBCC_CalC_Aha1-like_GntR-HTH Location: 6798-7182 bp Feature: domain Description: SRPBCC_CalC_Aha1 -like_GntR-HTH Location: 6798-71 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), RVT-UG5, CadC1 (COG3710), TPR (smart00028), SRPBCC_CalC_Aha1-like_GntR-HTH (cd08893)

Seq: CADEFN010000064.1 uncultured Gemmatimonadetes bacterium isolate Gemmatimonadetes sp. RBC101 genome assembly, contig: MAG101_64, whole genome shotgun sequence (2075 bp)
Overview 1 RT 1: 116-2074 bp Neighborhood of RT #1 [116, 2074] RVT-GII GIIM Feature: gene Location: 116-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1481 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1796 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1796 bp Feature: gene Location: 1925-2074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CADEFN010000071.1 uncultured Gemmatimonadetes bacterium isolate Gemmatimonadetes sp. RBC101 genome assembly, contig: MAG101_71, whole genome shotgun sequence (1817 bp)
Overview 1 RT 1: 3-1594 bp Neighborhood of RT #1 [3, 1815] RVT-GII GIIM Feature: gene Location: 3-152 bp Feature: gene Location: 436-1815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-13 3 3 bp Feature: domain Description: GIIM Note: maturase Location: 1390-1594 bp Feature: domain Description: GIIM Note: maturase Location: 13 90-1594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)