myRT

myRT report for GCA_902826775.1_RBC049

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Seq: CADEHE010000005.1 uncultured proteobacterium isolate Proteobacteria sp. RBC049 genome assembly, contig: MAG049_5, whole genome shotgun sequence (399931 bp)
Overview 1 RT 1: 131904-139238 bp Neighborhood of RT #1 [131904, 139501] PRK09193 mandelate_racemase RVT-AbiP2 Mtu_PIN_fam SDR_c Feature: gene Location: 131904-135404 bp Feature: domain Description: PRK09193 Location: 131910-135390 bp Feature: domain Description: PRK091 93 Location: 1 31 91 0-1 35390 bp Feature: gene Location: 135683-136798 bp Feature: domain Description: mandelate_racemase Location: 135725-136790 bp Feature: domain Description: mandelate_racemase Location: 1 35725-1 36790 bp Feature: gene Location: 136825-138333 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 137260-137719 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 37260-1 3771 9 bp Feature: gene Location: 138420-138854 bp Feature: domain Description: Mtu_PIN_fam Location: 138423-138846 bp Feature: domain Description: Mtu_PIN_fam Location: 1 38423-1 38846 bp Feature: gene Location: 139040-139501 bp Feature: domain Description: SDR_c Location: 139046-139238 bp Feature: domain Description: SDR_c Location: 1 39046-1 39238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09193 (indolepyruvate ferredoxin oxidoreductase; Validated), mandelate_racemase (cd03321), RVT-AbiP2, Mtu_PIN_fam (TIGR00028), SDR_c (cd05233)

Seq: CADEHE010000028.1 uncultured proteobacterium isolate Proteobacteria sp. RBC049 genome assembly, contig: MAG049_28, whole genome shotgun sequence (20692 bp)
Overview 1 RT 1: 11946-18633 bp Neighborhood of RT #1 [11946, 18683] VWA_CoxE KOG0273 YfmG Avd_like RVT-DGRs YfmG AcyC Feature: gene Location: 11946-15731 bp Feature: domain Description: VWA_CoxE Location: 12684-12930 bp Feature: domain Description: VWA_CoxE Location: 12 684-12 930 bp Feature: domain Description: KOG0273 Location: 14010-14229 bp Feature: domain Description: KOG02 73 Location: 14010-142 2 9 bp Feature: domain Description: YfmG Location: 14820-15726 bp Feature: domain Description: YfmG Location: 1482 0-1572 6 bp Feature: gene Location: 15804-16172 bp Feature: domain Description: Avd_like Location: 15849-16149 bp Feature: domain Description: Avd_like Location: 15849-16149 bp Feature: gene Location: 16291-17364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16483-17119 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16483-17119 bp Feature: gene Location: 17361-17657 bp Feature: domain Description: YfmG Location: 17370-17493 bp Feature: domain Description: YfmG Location: 17370-17493 bp Feature: gene Location: 17745-18683 bp Feature: domain Description: AcyC Location: 18015-18633 bp Feature: domain Description: AcyC Location: 18015-18633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VWA_CoxE (pfam05762), KOG0273 (KOG0273, Beta-transducin family (WD-40 repeat) protein ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, AcyC (COG2114)

Seq: CADEHE010000044.1 uncultured proteobacterium isolate Proteobacteria sp. RBC049 genome assembly, contig: MAG049_44, whole genome shotgun sequence (1813 bp)
Overview 1 RT 1: 89-1247 bp Neighborhood of RT #1 [89, 1405] RVT-GII GIIM Feature: gene Location: 89-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 74-986 bp Feature: domain Description: GIIM Note: maturase Location: 1043-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1043 -1247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)