myRT

myRT report for GCA_902826825.1_RBC031

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Seq: CADEGI010000121.1 uncultured Alphaproteobacteria bacterium isolate Alphaproteobacteria sp. RBC031 genome assembly, contig: MAG031_121, whole genome shotgun sequence (7598 bp)
Overview 1 RT 1: 1975-7596 bp Neighborhood of RT #1 [1975, 7595] pimC_large RVT-Retrons TIR_2 pimD_small PiuB PiuB Feature: gene Location: 1975-2268 bp Feature: gene Location: 2334-3548 bp Feature: domain Description: pimC_large Location: 2361-3546 bp Feature: domain Description: pimC_large Location: 2361 -3546 bp Feature: gene Location: 3757-5403 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3931-4540 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3931 -4540 bp Feature: domain Description: TIR_2 Location: 4882-5188 bp Feature: domain Description: TIR_2 Location: 4882-51 88 bp Feature: gene Location: 5471-6607 bp Feature: domain Description: pimD_small Location: 5477-6587 bp Feature: domain Description: pimD_small Location: 5477-6587 bp Feature: gene Location: 6618-7595 bp Feature: domain Description: PiuB Location: 6642-7257 bp Feature: domain Description: PiuB Location: 6642-7257 bp Feature: domain Description: PiuB Location: 7311-7596 bp Feature: domain Description: PiuB Location: 731 1 -7596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pimC_large (TIGR03204), RVT-Retrons, TIR_2 (pfam13676), pimD_small (TIGR03203), PiuB (COG3182)

Seq: CADEGI010000277.1 uncultured Alphaproteobacteria bacterium isolate Alphaproteobacteria sp. RBC031 genome assembly, contig: MAG031_277, whole genome shotgun sequence (1500 bp)
Overview 1 RT 1: 1-1496 bp Neighborhood of RT #1 [1, 1498] COG3636 RVT-Retrons Feature: gene Location: 1-129 bp Feature: domain Description: COG3636 Location: 4-121 bp Feature: domain Description: COG3636 Location: 4-12 1 bp Feature: gene Location: 482-1498 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 944-1496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 944-1496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3636 (DNA-binding prophage protein ), RVT-Retrons