myRT

myRT report for GCA_902829245.1_Q1714

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Seq: CADEPJ010000053.1 Comamonas jiangduensis isolate Q1714 genome assembly, contig: contig00053, whole genome shotgun sequence (9650 bp)
Overview 1 RT 1: 6018-8819 bp Neighborhood of RT #1 [6018, 8893] COG3531 GlxK RVT-GII GIIM HNHc Feature: gene Location: 6018-6656 bp Feature: domain Description: COG3531 Location: 6030-6651 bp Feature: domain Description: COG3531 Location: 6030-6651 bp Feature: gene Location: 6850-7713 bp Feature: domain Description: GlxK Location: 6859-7669 bp Feature: domain Description: GlxK Location: 6859-7669 bp Feature: gene Location: 7805-8893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7877-8159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7877-81 59 bp Feature: domain Description: GIIM Note: maturase Location: 8210-8441 bp Feature: domain Description: GIIM Note: maturase Location: 821 0-8441 bp Feature: domain Description: HNHc Note: nucleases Location: 8666-8819 bp Feature: domain Description: HNHc Note: nucleases Location: 8666-881 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3531 (Predicted protein-disulfide isomerase , contains CxxC motif ), GlxK (COG1929), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CADEPJ010000303.1 Comamonas jiangduensis isolate Q1714 genome assembly, contig: contig00303, whole genome shotgun sequence (24198 bp)
Overview 1 RT 1: 3129-8265 bp Neighborhood of RT #1 [3129, 8297] HAD_SAK_2 RVT-UG11 SF2_C_SNF PLDc_N_DEXD_a DEXDc_RapA Feature: gene Location: 3129-3515 bp Feature: gene Location: 3651-4202 bp Feature: domain Description: HAD_SAK_2 Location: 3675-4164 bp Feature: domain Description: HAD_SAK_2 Location: 3675-4164 bp Feature: gene Location: 4791-5549 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4917-5367 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4917-5367 bp Feature: gene Location: 5567-6865 bp Feature: domain Description: SF2_C_SNF Location: 6101-6551 bp Feature: domain Description: SF2 _C_SNF Location: 6101-6551 bp Feature: gene Location: 6870-8297 bp Feature: domain Description: PLDc_N_DEXD_a Location: 6885-7404 bp Feature: domain Description: PLDc_N_DEXD_a Location: 6885-7404 bp Feature: domain Description: DEXDc_RapA Location: 7551-8265 bp Feature: domain Description: DEXDc_RapA Location: 7551-82 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_SAK_2 (pfam18143), RVT-UG11, SF2_C_SNF (cd18793), PLDc_N_DEXD_a (cd09179), DEXDc_RapA (cd18011)