myRT

myRT report for GCA_902829355.1_ASM90282935v1

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Seq: CADEPP010000001.1 TPA_asm: Burkholderia gladioli strain BCC1701 genome assembly, contig: B_gladioli_BCC1701_ERS784867_SC_contig000001, whole genome shotgun sequence (769290 bp)
Overview 1 RT 1: 120977-124215 bp Neighborhood of RT #1 [120977, 124481] PaaI HxlR RVT-Retrons Feature: gene Location: 120977-121414 bp Feature: domain Description: PaaI Location: 121037-121406 bp Feature: domain Description: PaaI Location: 1 21 037-1 21 406 bp Feature: gene Location: 121571-122047 bp Feature: domain Description: HxlR Location: 121592-121919 bp Feature: domain Description: HxlR Location: 1 21 592-1 21 91 9 bp Feature: gene Location: 123378-124481 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 123588-124215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 23588-1 2421 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaI (COG2050), HxlR (pfam01638), RVT-Retrons

Seq: CADEPP010000028.1 TPA_asm: Burkholderia gladioli strain BCC1701 genome assembly, contig: B_gladioli_BCC1701_ERS784867_SC_contig000028, whole genome shotgun sequence (94965 bp)
Overview 1 RT 1: 51995-57005 bp Neighborhood of RT #1 [51995, 57010] YtcJ_like RVT-GII GIIM PRK09409 PRK09413 Feature: gene Location: 51995-53872 bp Feature: domain Description: YtcJ_like Location: 52193-53762 bp Feature: domain Description: YtcJ_like Location: 52 193-53762 bp Feature: gene Location: 54080-54382 bp Feature: gene Location: 54686-55765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54746-55409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54746-55409 bp Feature: domain Description: GIIM Note: maturase Location: 55478-55694 bp Feature: domain Description: GIIM Note: maturase Location: 55478-55694 bp Feature: gene Location: 55776-56618 bp Feature: domain Description: PRK09409 Location: 55788-56604 bp Feature: domain Description: PRK09409 Location: 55788-56604 bp Feature: gene Location: 56615-57010 bp Feature: domain Description: PRK09413 Location: 56663-57005 bp Feature: domain Description: PRK09413 Location: 56663-57005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtcJ_like (cd01300), RVT-GII, GIIM (pfam08388), PRK09409 (IS2 transposase TnpB; Reviewed), PRK09413 (IS2 repressor TnpA; Reviewed)