myRT

myRT report for GCA_902829375.1_ASM90282937v1

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Seq: CADEPY010000010.1 TPA_asm: Burkholderia anthina strain BCC0485 genome assembly, contig: Burkholderia_anthina_BCC0485_NODE_10_length_208494_cov_9.98362_pilon, whole genome shotgun sequence (208494 bp)
Overview 1 RT 1: 145267-152100 bp Neighborhood of RT #1 [145267, 152135] PRK05324 PBP2_HisJ_LAO RVT-GII GIIM HDOD PAS PRK11359 Feature: gene Location: 145267-146352 bp Feature: domain Description: PRK05324 Location: 145285-146329 bp Feature: domain Description: PRK05324 Location: 1 45285-1 46329 bp Feature: gene Location: 146707-147501 bp Feature: domain Description: PBP2_HisJ_LAO Location: 146797-147478 bp Feature: domain Description: PBP2_HisJ_LAO Location: 1 46797-1 47478 bp Feature: gene Location: 147955-148638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147970-148195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47970-1 481 95 bp Feature: domain Description: GIIM Note: maturase Location: 148243-148465 bp Feature: domain Description: GIIM Note: maturase Location: 1 48243-1 48465 bp Feature: gene Location: 148757-150277 bp Feature: domain Description: HDOD Location: 148838-149408 bp Feature: domain Description: HDOD Location: 1 48838-1 49408 bp Feature: gene Location: 150303-152135 bp Feature: domain Description: PAS Location: 150489-150753 bp Feature: domain Description: PAS Location: 1 50489-1 50753 bp Feature: domain Description: PRK11359 Location: 150807-152100 bp Feature: domain Description: PRK1 1 359 Location: 1 50807-1 521 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05324 (succinylglutamate desuccinylase; Provisional), PBP2_HisJ_LAO (cd13703), RVT-GII, GIIM (pfam08388), HDOD (pfam08668), PAS (smart00091), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional)

Seq: CADEPY010000023.1 TPA_asm: Burkholderia anthina strain BCC0485 genome assembly, contig: Burkholderia_anthina_BCC0485_NODE_23_length_133000_cov_8.79183_pilon, whole genome shotgun sequence (133000 bp)
Overview 1 RT 1: 41201-46745 bp Neighborhood of RT #1 [41201, 46780] MFS_MucK Histone_HNS RVT-Retrons FIN dTDP_HR_like_SDR_e Feature: gene Location: 41201-42535 bp Feature: domain Description: MFS_MucK Location: 41378-42512 bp Feature: domain Description: MFS_MucK Location: 41378-42 512 bp Feature: gene Location: 42710-44002 bp Feature: domain Description: Histone_HNS Location: 43694-43931 bp Feature: domain Description: Histone_HNS Location: 43694-43931 bp Feature: gene Location: 43405-44865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43981-44617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43981-44617 bp Feature: gene Location: 44988-45560 bp Feature: domain Description: FIN Location: 45168-45525 bp Feature: domain Description: FIN Location: 45168-4552 5 bp Feature: gene Location: 45740-46780 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 45854-46745 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 45854-46745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), dTDP_HR_like_SDR_e (cd05254)