myRT

myRT report for GCA_902829445.1_ASM90282944v1

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Seq: CADEQA010000006.1 TPA_asm: Burkholderia cenocepacia strain BCC1322 genome assembly, contig: B_cenocepacia_BCC1322_ERS784842_SC_contig000006, whole genome shotgun sequence (571012 bp)
Overview 1 RT 1: 520023-526144 bp Neighborhood of RT #1 [520023, 526144] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 520023-520328 bp Feature: gene Location: 520464-521519 bp Feature: domain Description: DEXHc_Snf Location: 520683-520944 bp Feature: domain Description: DEXHc_Snf Location: 520683-520944 bp Feature: gene Location: 522116-523834 bp Feature: RT Description: RVT_N Location: 522173-522410 bp Feature: RT Description: RVT_N Location: 5221 73-52241 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522461-523112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522461 -5231 1 2 bp Feature: domain Description: GIIM Note: maturase Location: 523166-523397 bp Feature: domain Description: GIIM Note: maturase Location: 5231 66-523397 bp Feature: domain Description: HNHc Note: nucleases Location: 523631-523787 bp Feature: domain Description: HNHc Note: nucleases Location: 523631 -523787 bp Feature: gene Location: 524001-525161 bp Feature: domain Description: SF2_C_SNF Location: 524601-524997 bp Feature: domain Description: SF2_C_SNF Location: 524601 -524997 bp Feature: gene Location: 525275-526144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SF2_C_SNF (cd18793)

Seq: CADEQA010000008.1 TPA_asm: Burkholderia cenocepacia strain BCC1322 genome assembly, contig: B_cenocepacia_BCC1322_ERS784842_SC_contig000008, whole genome shotgun sequence (359390 bp)
Overview 1 RT 1: 229003-234332 bp Neighborhood of RT #1 [229003, 234337] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 229003-230250 bp Feature: domain Description: MFS_MucK Location: 229093-230227 bp Feature: domain Description: MFS_MucK Location: 2 2 9093-2 302 2 7 bp Feature: gene Location: 230536-230865 bp Feature: domain Description: Histone_HNS Location: 230557-230794 bp Feature: domain Description: Histone_HNS Location: 2 30557-2 30794 bp Feature: gene Location: 231185-232534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 231650-232286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 31650-2 32 2 86 bp Feature: gene Location: 232787-233359 bp Feature: domain Description: FIN Location: 232967-233324 bp Feature: domain Description: FIN Location: 2 32 967-2 3332 4 bp Feature: gene Location: 233582-234337 bp Feature: domain Description: his_ut_repres Location: 233660-234332 bp Feature: domain Description: his_ut_repres Location: 2 33660-2 34332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADEQA010000019.1 TPA_asm: Burkholderia cenocepacia strain BCC1322 genome assembly, contig: B_cenocepacia_BCC1322_ERS784842_SC_contig000019, whole genome shotgun sequence (99447 bp)
Overview 1 RT 1: 68129-73414 bp Neighborhood of RT #1 [68129, 73416] MSMEG_0572_fam ARO8 RVT-GII gram_neg_porins Feature: gene Location: 68129-68611 bp Feature: domain Description: MSMEG_0572_fam Location: 68135-68609 bp Feature: domain Description: MSMEG_0572_fam Location: 6813 5-68609 bp Feature: gene Location: 68994-70385 bp Feature: domain Description: ARO8 Location: 69048-70356 bp Feature: domain Description: ARO8 Location: 69048-703 56 bp Feature: gene Location: 70523-71800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70733-71420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7073 3 -71420 bp Feature: gene Location: 71886-72197 bp Feature: gene Location: 72358-73416 bp Feature: domain Description: gram_neg_porins Location: 72430-73414 bp Feature: domain Description: gram_neg_porins Location: 7243 0-73 414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MSMEG_0572_fam (TIGR04044), ARO8 (COG1167), RVT-GII, gram_neg_porins (cd00342)