myRT

myRT report for GCA_902829475.1_ASM90282947v1

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Seq: CADEQF010000015.1 TPA_asm: Burkholderia ambifaria strain BCC1258 genome assembly, contig: NODE_15_length_200428_cov_12.2329_pilon, whole genome shotgun sequence (200428 bp)
Overview 1 RT 1: 164247-168171 bp Neighborhood of RT #1 [164247, 168242] DoxX dTDP_HR_like_SDR_e RVT-Retrons Histone_HNS Feature: gene Location: 164247-164660 bp Feature: domain Description: DoxX Location: 164280-164658 bp Feature: domain Description: DoxX Location: 1 64280-1 64658 bp Feature: gene Location: 164697-165767 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 164841-165726 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 1 64841 -1 65726 bp Feature: gene Location: 166089-167549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 166668-167301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 66668-1 67301 bp Feature: gene Location: 167699-168040 bp Feature: gene Location: 167757-168242 bp Feature: domain Description: Histone_HNS Location: 167934-168171 bp Feature: domain Description: Histone_HNS Location: 1 67934-1 681 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DoxX (pfam07681), dTDP_HR_like_SDR_e (cd05254), RVT-Retrons, Histone_HNS (pfam00816)

Seq: CADEQF010000039.1 TPA_asm: Burkholderia ambifaria strain BCC1258 genome assembly, contig: NODE_39_length_25930_cov_12.3722_pilon, whole genome shotgun sequence (25930 bp)
Overview 1 RT 1: 12585-16383 bp Neighborhood of RT #1 [12585, 16394] SRAP RVT-GII ALDH_CddD_SSP0762 Feature: gene Location: 12585-12959 bp Feature: gene Location: 13006-13503 bp Feature: domain Description: SRAP Location: 13039-13468 bp Feature: domain Description: SRAP Location: 13039-13468 bp Feature: gene Location: 13560-14528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13662-14097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13662 -14097 bp Feature: gene Location: 14759-14929 bp Feature: gene Location: 14973-16394 bp Feature: domain Description: ALDH_CddD_SSP0762 Location: 14994-16383 bp Feature: domain Description: ALDH_CddD_SSP0762 Location: 14994-16383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII, ALDH_CddD_SSP0762 (cd07138)