myRT

myRT report for GCA_902829515.1_ASM90282951v1

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Seq: CADEQG010000008.1 TPA_asm: Burkholderia oklahomensis strain LMG 23618 genome assembly, contig: B_oklahomensis_BCC1605_ERS784979_SC_contig000008, whole genome shotgun sequence (336498 bp)
Overview 1 RT 1: 6280-10928 bp Neighborhood of RT #1 [6280, 11041] InsE TnpB_IS66 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C PRK06526 Feature: gene Location: 6280-6708 bp Feature: domain Description: InsE Location: 6346-6586 bp Feature: domain Description: InsE Location: 6346-6586 bp Feature: gene Location: 6705-7037 bp Feature: domain Description: TnpB_IS66 Location: 6732-7020 bp Feature: domain Description: TnpB_IS66 Location: 6732-7020 bp Feature: gene Location: 7487-8848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7778-8468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7778-8468 bp Feature: gene Location: 8991-10538 bp Feature: domain Description: LZ_Tnp_IS66 Location: 9093-9309 bp Feature: domain Description: LZ_Tnp_IS66 Location: 9093-9309 bp Feature: domain Description: zf-IS66 Location: 9333-9456 bp Feature: domain Description: zf-IS66 Location: 9333-9456 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9504-10359 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9504-1 0359 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 10380-10491 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 0380-1 0491 bp Feature: gene Location: 10682-11041 bp Feature: domain Description: PRK06526 Location: 10685-10928 bp Feature: domain Description: PRK06526 Location: 1 0685-1 0928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), InsE (COG2963), TnpB_IS66 (pfam05717), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)