myRT

myRT report for GCA_902829625.1_ASM90282962v1

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Seq: CADEQT010000002.1 TPA_asm: Burkholderia anthina strain BCC0638 genome assembly, contig: Burkholderia_anthina_BCC0638_NODE_2_length_353034_cov_13.6266_pilon, whole genome shotgun sequence (353034 bp)
Overview 1 RT 1: 23360-30361 bp Neighborhood of RT #1 [23360, 33009] RVT-Retrons PinE pfam13191 TPR_19 Feature: gene Location: 23360-24328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23489-24047 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23489-24047 bp Feature: gene Location: 26070-26645 bp Feature: domain Description: PinE Location: 26079-26628 bp Feature: domain Description: PinE Location: 26079-26628 bp Feature: gene Location: 26950-33009 bp Feature: domain Description: pfam13191 Location: 27763-28123 bp Feature: domain Description: pfam1 31 91 Location: 27763-281 23 bp Feature: domain Description: TPR_19 Location: 30199-30361 bp Feature: domain Description: TPR_1 9 Location: 301 99-30361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PinE (COG1961), pfam13191 (AAA_16;AAA ATPase domain), TPR_19 (pfam14559)

Seq: CADEQT010000019.1 TPA_asm: Burkholderia anthina strain BCC0638 genome assembly, contig: Burkholderia_anthina_BCC0638_NODE_19_length_139836_cov_15.9782_pilon, whole genome shotgun sequence (139836 bp)
Overview 1 RT 1: 85535-90957 bp Neighborhood of RT #1 [85535, 90980] dTDP_HR_like_SDR_e FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 85535-86473 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 85553-86441 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 85553-86441 bp Feature: gene Location: 86619-87191 bp Feature: domain Description: FIN Location: 86799-87153 bp Feature: domain Description: FIN Location: 86799-87153 bp Feature: gene Location: 87314-88774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87890-88526 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87890-8852 6 bp Feature: gene Location: 88797-89471 bp Feature: domain Description: Histone_HNS Location: 89163-89400 bp Feature: domain Description: Histone_HNS Location: 89163-89400 bp Feature: gene Location: 89646-90980 bp Feature: domain Description: MFS_MucK Location: 89823-90957 bp Feature: domain Description: MFS_MucK Location: 8982 3-90957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_HR_like_SDR_e (cd05254), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADEQT010000028.1 TPA_asm: Burkholderia anthina strain BCC0638 genome assembly, contig: Burkholderia_anthina_BCC0638_NODE_28_length_98630_cov_17.8364_pilon, whole genome shotgun sequence (98630 bp)
Overview 1 RT 1: 63966-78155 bp Neighborhood of RT #1 [63966, 78196] ESPR Haemagg_act FHA_bHelix FHA_bHelix fil_hemag_20aa FHA_bHelix fil_hemag_20aa fil_hemag_20aa FHA_bHelix FHA_bHelix FHA_bHelix Fil_haemagg_2 Fil_haemagg_2 Tnp_DNA_bind RVT-GII GIIM Dimer_Tnp_Tn5 Fil_haemagg_2 Feature: gene Location: 63966-73559 bp Feature: domain Description: ESPR Location: 63969-64038 bp Feature: domain Description: ESPR Location: 63 969-6403 8 bp Feature: domain Description: Haemagg_act Location: 64206-64605 bp Feature: domain Description: Haemagg_act Location: 64206-64605 bp Feature: domain Description: FHA_bHelix Location: 64911-65175 bp Feature: domain Description: FHA_bHelix Location: 64911-65175 bp Feature: domain Description: FHA_bHelix Location: 65199-65763 bp Feature: domain Description: FHA_bHelix Location: 65199-65763 bp Feature: domain Description: fil_hemag_20aa Location: 65868-65976 bp Feature: domain Description: fil_hemag_20aa Location: 65868-65976 bp Feature: domain Description: FHA_bHelix Location: 66060-66606 bp Feature: domain Description: FHA_bHelix Location: 66060-66606 bp Feature: domain Description: fil_hemag_20aa Location: 66666-66783 bp Feature: domain Description: fil_hemag_20aa Location: 66666-66783 bp Feature: domain Description: fil_hemag_20aa Location: 66789-66894 bp Feature: domain Description: fil_hemag_20aa Location: 66789-66894 bp Feature: domain Description: FHA_bHelix Location: 66939-67233 bp Feature: domain Description: FHA_bHelix Location: 6693 9-6723 3 bp Feature: domain Description: FHA_bHelix Location: 67296-67884 bp Feature: domain Description: FHA_bHelix Location: 67296-67884 bp Feature: domain Description: FHA_bHelix Location: 69771-70326 bp Feature: domain Description: FHA_bHelix Location: 69771-703 26 bp Feature: domain Description: Fil_haemagg_2 Location: 70476-70746 bp Feature: domain Description: Fil_haemagg_2 Location: 70476-70746 bp Feature: domain Description: Fil_haemagg_2 Location: 71178-71679 bp Feature: domain Description: Fil_haemagg_2 Location: 71178-71679 bp Feature: gene Location: 73942-74940 bp Feature: domain Description: Tnp_DNA_bind Location: 73966-74134 bp Feature: domain Description: Tnp_DNA_bind Location: 73 966-7413 4 bp Feature: gene Location: 75458-76708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75662-76316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75662-763 16 bp Feature: domain Description: GIIM Note: maturase Location: 76400-76622 bp Feature: domain Description: GIIM Note: maturase Location: 76400-76622 bp Feature: gene Location: 76761-77183 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 76881-77160 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 76881-77160 bp Feature: gene Location: 77915-78196 bp Feature: domain Description: Fil_haemagg_2 Location: 77918-78155 bp Feature: domain Description: Fil_haemagg_2 Location: 77918-78155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ESPR (pfam13018), Haemagg_act (smart00912), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731), Fil_haemagg_2 (pfam13332), Tnp_DNA_bind (pfam14706), RVT-GII, GIIM (pfam08388), Dimer_Tnp_Tn5 (pfam02281)