myRT

myRT report for GCA_902829735.1_ASM90282973v1

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Seq: CADERI010000007.1 TPA_asm: Burkholderia ambifaria strain BCC0480 genome assembly, contig: NODE_7_length_473132_cov_16.9452_pilon, whole genome shotgun sequence (473132 bp)
Overview 1 RT 1: 341875-345866 bp Neighborhood of RT #1 [341875, 345868] Histone_HNS RVT-Retrons dTDP_HR_like_SDR_e DoxX Feature: gene Location: 341875-342465 bp Feature: domain Description: Histone_HNS Location: 342157-342394 bp Feature: domain Description: Histone_HNS Location: 3421 57-342394 bp Feature: gene Location: 342359-342502 bp Feature: gene Location: 342569-344029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 343145-343781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3431 45-343781 bp Feature: gene Location: 344350-345438 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 344512-345397 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 34451 2-345397 bp Feature: gene Location: 345455-345868 bp Feature: domain Description: DoxX Location: 345488-345866 bp Feature: domain Description: DoxX Location: 345488-345866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, dTDP_HR_like_SDR_e (cd05254), DoxX (pfam07681)

Seq: CADERI010000017.1 TPA_asm: Burkholderia ambifaria strain BCC0480 genome assembly, contig: NODE_17_length_128003_cov_24.4565_pilon, whole genome shotgun sequence (128003 bp)
Overview 1 RT 1: 7230-11122 bp Neighborhood of RT #1 [7230, 11298] SRAP RVT-GII COG4544 Feature: gene Location: 7230-7400 bp Feature: gene Location: 7682-8593 bp Feature: domain Description: SRAP Location: 8069-8561 bp Feature: domain Description: SRAP Location: 8069-8561 bp Feature: gene Location: 8649-10313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9192-9882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9192 -9882 bp Feature: gene Location: 9825-10481 bp Feature: gene Location: 10582-11298 bp Feature: domain Description: COG4544 Location: 10675-11122 bp Feature: domain Description: COG4544 Location: 10675-1112 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4544 (Uncharacterized conserved protein ), SRAP (pfam02586), RVT-GII