myRT

myRT report for GCA_902829955.1_ASM90282995v1

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Seq: CADESD010000002.1 TPA_asm: Burkholderia ambifaria strain BCC1212 genome assembly, contig: NODE_2_length_665113_cov_12.2653_pilon, whole genome shotgun sequence (665113 bp)
Overview 1 RT 1: 199549-206224 bp Neighborhood of RT #1 [199549, 206224] Trypsin_2 Trypsin_2 RVT-UG17 SLATT_5 Feature: gene Location: 199549-201450 bp Feature: domain Description: Trypsin_2 Location: 199951-200524 bp Feature: domain Description: Trypsin_2 Location: 1 99951 -200524 bp Feature: gene Location: 201455-202624 bp Feature: domain Description: Trypsin_2 Location: 201932-202451 bp Feature: domain Description: Trypsin_2 Location: 201 932-202451 bp Feature: gene Location: 203061-204329 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 203166-203763 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2031 66-203763 bp Feature: gene Location: 204458-205090 bp Feature: domain Description: SLATT_5 Location: 204503-205070 bp Feature: domain Description: SLATT_5 Location: 204503-205070 bp Feature: gene Location: 205370-206224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-UG17, SLATT_5 (pfam18160)

Seq: CADESD010000027.1 TPA_asm: Burkholderia ambifaria strain BCC1212 genome assembly, contig: NODE_27_length_54229_cov_13.3565_pilon, whole genome shotgun sequence (54229 bp)
Overview 1 RT 1: 3-6627 bp Neighborhood of RT #1 [3, 6638] FimA RVT-UG4 FimD PRK09926 Feature: gene Location: 3-155 bp Feature: gene Location: 934-1890 bp Feature: domain Description: FimA Location: 1402-1888 bp Feature: domain Description: FimA Location: 1402 -1888 bp Feature: gene Location: 2065-3078 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2425-2869 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 42 5-2 869 bp Feature: gene Location: 3075-5729 bp Feature: domain Description: FimD Location: 3105-5613 bp Feature: domain Description: FimD Location: 3105-5613 bp Feature: gene Location: 5838-6638 bp Feature: domain Description: PRK09926 Location: 5913-6627 bp Feature: domain Description: PRK0992 6 Location: 5913-662 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimA (pfam16970), RVT-UG4, FimD (COG3188), PRK09926 (fimbrial chaperone)