myRT

myRT report for GCA_902830135.1_ASM90283013v1

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Seq: CADETF010000016.1 TPA_asm: Burkholderia ambifaria strain BCC1248 genome assembly, contig: NODE_16_length_156414_cov_12.4909_pilon, whole genome shotgun sequence (156414 bp)
Overview 1 RT 1: 34292-38962 bp Neighborhood of RT #1 [34292, 38964] Histone_HNS RVT-Retrons dTDP_HR_like_SDR_e DoxX Feature: gene Location: 34292-34435 bp Feature: gene Location: 34959-36674 bp Feature: domain Description: Histone_HNS Location: 36366-36603 bp Feature: domain Description: Histone_HNS Location: 36366-36603 bp Feature: gene Location: 35654-37114 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36230-36866 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36230-36866 bp Feature: gene Location: 37445-38398 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 37472-38360 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 37472-38360 bp Feature: gene Location: 38551-38964 bp Feature: domain Description: DoxX Location: 38584-38962 bp Feature: domain Description: DoxX Location: 38584-38962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, dTDP_HR_like_SDR_e (cd05254), DoxX (pfam07681)

Seq: CADETF010000024.1 TPA_asm: Burkholderia ambifaria strain BCC1248 genome assembly, contig: NODE_24_length_110214_cov_12.7708_pilon, whole genome shotgun sequence (110214 bp)
Overview 1 RT 1: 85936-96449 bp Neighborhood of RT #1 [85936, 96541] OmpR RVT_N RVT-GII YkfC UvrA UvrA UvrA UvrA PBP2_GltI_DEBP Feature: gene Location: 85936-86106 bp Feature: gene Location: 86118-86855 bp Feature: domain Description: OmpR Location: 86121-86799 bp Feature: domain Description: OmpR Location: 8612 1-86799 bp Feature: gene Location: 87346-88869 bp Feature: RT Description: RVT_N Location: 87394-87637 bp Feature: RT Description: RVT_N Location: 87394-87637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87682-88348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87682 -88348 bp Feature: domain Description: YkfC Location: 88477-88654 bp Feature: domain Description: YkfC Location: 88477-88654 bp Feature: gene Location: 89529-95519 bp Feature: domain Description: UvrA Location: 89628-92574 bp Feature: domain Description: UvrA Location: 8962 8-92 574 bp Feature: domain Description: UvrA Location: 92676-93591 bp Feature: domain Description: UvrA Location: 92 676-93591 bp Feature: domain Description: UvrA Location: 93669-94494 bp Feature: domain Description: UvrA Location: 93669-94494 bp Feature: domain Description: UvrA Location: 94614-95463 bp Feature: domain Description: UvrA Location: 94614-95463 bp Feature: gene Location: 95600-96541 bp Feature: domain Description: PBP2_GltI_DEBP Location: 95738-96449 bp Feature: domain Description: PBP2 _GltI_DEBP Location: 95738-96449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), UvrA (COG0178), PBP2_GltI_DEBP (cd13688)