myRT

myRT report for GCA_902830155.1_ASM90283015v1

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Seq: CADESU010000016.1 TPA_asm: Burkholderia ambifaria strain BCC1270 genome assembly, contig: NODE_16_length_200400_cov_11.1719_pilon, whole genome shotgun sequence (200400 bp)
Overview 1 RT 1: 31714-36160 bp Neighborhood of RT #1 [31714, 36162] MFS_MucK Histone_HNS RVT-Retrons dTDP_HR_like_SDR_e DoxX Feature: gene Location: 31714-31956 bp Feature: domain Description: MFS_MucK Location: 31717-31933 bp Feature: domain Description: MFS_MucK Location: 31 71 7-31 933 bp Feature: gene Location: 32167-32844 bp Feature: domain Description: Histone_HNS Location: 32536-32773 bp Feature: domain Description: Histone_HNS Location: 32536-32773 bp Feature: gene Location: 32860-34320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33439-34072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33439-34072 bp Feature: gene Location: 34642-35712 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 34786-35671 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 34786-35671 bp Feature: gene Location: 35749-36162 bp Feature: domain Description: DoxX Location: 35782-36160 bp Feature: domain Description: DoxX Location: 35782-361 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, dTDP_HR_like_SDR_e (cd05254), DoxX (pfam07681)

Seq: CADESU010000034.1 TPA_asm: Burkholderia ambifaria strain BCC1270 genome assembly, contig: NODE_34_length_25890_cov_10.2605_pilon, whole genome shotgun sequence (25890 bp)
Overview 1 RT 1: 9517-13338 bp Neighborhood of RT #1 [9517, 13338] ALDH_CddD_SSP0762 RVT-GII SRAP Feature: gene Location: 9517-10938 bp Feature: domain Description: ALDH_CddD_SSP0762 Location: 9538-10927 bp Feature: domain Description: ALDH_CddD_SSP0762 Location: 9538-1092 7 bp Feature: gene Location: 10982-11152 bp Feature: gene Location: 11383-12351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11485-11920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11485-1192 0 bp Feature: gene Location: 12408-12905 bp Feature: domain Description: SRAP Location: 12441-12870 bp Feature: domain Description: SRAP Location: 12 441-12 870 bp Feature: gene Location: 12952-13338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SRAP (pfam02586), ALDH_CddD_SSP0762 (cd07138)