myRT

myRT report for GCA_902830235.1_ASM90283023v1

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Seq: CADETA010000008.1 TPA_asm: Burkholderia gladioli strain BCC1864 genome assembly, contig: Burkholderia_gladioli_BCC1864_NODE_8_length_280973_cov_7.28655_pilon, whole genome shotgun sequence (280973 bp)
Overview 1 RT 1: 242524-247795 bp Neighborhood of RT #1 [242524, 248406] VRR_NUC SRAP RVT-Retrons Trypsin_2 HTH_XRE T5orf172 Feature: gene Location: 242524-243087 bp Feature: domain Description: VRR_NUC Location: 242581-242893 bp Feature: domain Description: VRR_NUC Location: 242581 -242893 bp Feature: gene Location: 243947-244642 bp Feature: domain Description: SRAP Location: 243950-244598 bp Feature: domain Description: SRAP Location: 243950-244598 bp Feature: gene Location: 244688-246616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 244862-245468 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 244862-245468 bp Feature: domain Description: Trypsin_2 Location: 245942-246425 bp Feature: domain Description: Trypsin_2 Location: 245942-246425 bp Feature: gene Location: 246801-247181 bp Feature: domain Description: HTH_XRE Location: 246864-247035 bp Feature: domain Description: HTH_XRE Location: 246864-247035 bp Feature: gene Location: 247366-248406 bp Feature: domain Description: T5orf172 Location: 247543-247795 bp Feature: domain Description: T5orf1 72 Location: 247543-247795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VRR_NUC (smart00990), SRAP (pfam02586), RVT-Retrons, Trypsin_2 (pfam13365), HTH_XRE (smart00530), T5orf172 (smart00974)

Seq: CADETA010000068.1 TPA_asm: Burkholderia gladioli strain BCC1864 genome assembly, contig: Burkholderia_gladioli_BCC1864_NODE_68_length_15167_cov_8.07758_pilon, whole genome shotgun sequence (15167 bp)
Overview 1 RT 1: 4358-15164 bp Neighborhood of RT #1 [4358, 15166] ESPR Haemagg_act FHA_bHelix FHA_bHelix FHA_bHelix FHA_bHelix fil_hemag_20aa fil_hemag_20aa fil_hemag_20aa FHA_bHelix FHA_bHelix Fil_haemagg_2 Fil_haemagg_2 Fil_haemagg_2 Fil_haemagg_2 RVT-UG17 HTH_29 Feature: gene Location: 4358-13792 bp Feature: domain Description: ESPR Location: 4361-4430 bp Feature: domain Description: ESPR Location: 4361-4430 bp Feature: domain Description: Haemagg_act Location: 4613-4979 bp Feature: domain Description: Haemagg_act Location: 4613-4979 bp Feature: domain Description: FHA_bHelix Location: 5297-5627 bp Feature: domain Description: FHA_bHelix Location: 52 97-562 7 bp Feature: domain Description: FHA_bHelix Location: 5627-6146 bp Feature: domain Description: FHA_bHelix Location: 562 7-6146 bp Feature: domain Description: FHA_bHelix Location: 6152-6617 bp Feature: domain Description: FHA_bHelix Location: 6152 -6617 bp Feature: domain Description: FHA_bHelix Location: 6620-7235 bp Feature: domain Description: FHA_bHelix Location: 662 0-72 35 bp Feature: domain Description: fil_hemag_20aa Location: 7352-7460 bp Feature: domain Description: fil_hemag_2 0aa Location: 7352 -7460 bp Feature: domain Description: fil_hemag_20aa Location: 7586-7703 bp Feature: domain Description: fil_hemag_2 0aa Location: 7586-7703 bp Feature: domain Description: fil_hemag_20aa Location: 7730-7826 bp Feature: domain Description: fil_hemag_2 0aa Location: 7730-782 6 bp Feature: domain Description: FHA_bHelix Location: 7865-8228 bp Feature: domain Description: FHA_bHelix Location: 7865-82 2 8 bp Feature: domain Description: FHA_bHelix Location: 9593-10025 bp Feature: domain Description: FHA_bHelix Location: 9593-1002 5 bp Feature: domain Description: Fil_haemagg_2 Location: 10112-10319 bp Feature: domain Description: Fil_haemagg_2 Location: 10112 -10319 bp Feature: domain Description: Fil_haemagg_2 Location: 10340-10748 bp Feature: domain Description: Fil_haemagg_2 Location: 10340-10748 bp Feature: domain Description: Fil_haemagg_2 Location: 10826-11123 bp Feature: domain Description: Fil_haemagg_2 Location: 1082 6-1112 3 bp Feature: domain Description: Fil_haemagg_2 Location: 11249-11765 bp Feature: domain Description: Fil_haemagg_2 Location: 112 49-11765 bp Feature: gene Location: 14169-14372 bp Feature: gene Location: 14446-14646 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14455-14641 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14455-14641 bp Feature: gene Location: 14984-15166 bp Feature: domain Description: HTH_29 Location: 15026-15164 bp Feature: domain Description: HTH_2 9 Location: 1502 6-15164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ESPR (pfam13018), Haemagg_act (smart00912), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731), Fil_haemagg_2 (pfam13332), RVT-UG17, HTH_29 (pfam13551)