myRT

myRT report for GCA_902830345.1_ASM90283034v1

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Seq: CADETV010000004.1 TPA_asm: Burkholderia anthina strain BCC0636 genome assembly, contig: Burkholderia_anthina_BCC0636_NODE_4_length_385473_cov_13.4464_pilon, whole genome shotgun sequence (385473 bp)
Overview 1 RT 1: 115538-119503 bp Neighborhood of RT #1 [115538, 119503] RVT-DGRs Avd_like Feature: gene Location: 115538-116908 bp Feature: gene Location: 116905-117297 bp Feature: gene Location: 117308-118636 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 117734-118421 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 7734-1 1 8421 bp Feature: gene Location: 118629-119006 bp Feature: domain Description: Avd_like Location: 118656-118962 bp Feature: domain Description: Avd_like Location: 1 1 8656-1 1 8962 bp Feature: gene Location: 119021-119503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: CADETV010000014.1 TPA_asm: Burkholderia anthina strain BCC0636 genome assembly, contig: Burkholderia_anthina_BCC0636_NODE_14_length_184270_cov_13.5113_pilon, whole genome shotgun sequence (184270 bp)
Overview 1 RT 1: 120758-127605 bp Neighborhood of RT #1 [120758, 127640] PRK05324 PBP2_HisJ_LAO RVT-GII GIIM HDOD PAS PRK11359 Feature: gene Location: 120758-121843 bp Feature: domain Description: PRK05324 Location: 120776-121820 bp Feature: domain Description: PRK0532 4 Location: 12 0776-12 182 0 bp Feature: gene Location: 122212-123006 bp Feature: domain Description: PBP2_HisJ_LAO Location: 122302-122983 bp Feature: domain Description: PBP2 _HisJ_LAO Location: 12 2 302 -12 2 983 bp Feature: gene Location: 123460-124143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123475-123700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3475-12 3700 bp Feature: domain Description: GIIM Note: maturase Location: 123748-123970 bp Feature: domain Description: GIIM Note: maturase Location: 12 3748-12 3970 bp Feature: gene Location: 124262-125782 bp Feature: domain Description: HDOD Location: 124343-124913 bp Feature: domain Description: HDOD Location: 12 4343-12 4913 bp Feature: gene Location: 125808-127640 bp Feature: domain Description: PAS Location: 125994-126258 bp Feature: domain Description: PAS Location: 12 5994-12 62 58 bp Feature: domain Description: PRK11359 Location: 126312-127605 bp Feature: domain Description: PRK11359 Location: 12 6312 -12 7605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05324 (succinylglutamate desuccinylase; Provisional), PBP2_HisJ_LAO (cd13703), RVT-GII, GIIM (pfam08388), HDOD (pfam08668), PAS (smart00091), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional)

Seq: CADETV010000023.1 TPA_asm: Burkholderia anthina strain BCC0636 genome assembly, contig: Burkholderia_anthina_BCC0636_NODE_23_length_132957_cov_14.5926_pilon, whole genome shotgun sequence (132957 bp)
Overview 1 RT 1: 41204-46732 bp Neighborhood of RT #1 [41204, 46767] MFS_MucK Histone_HNS RVT-Retrons FIN dTDP_HR_like_SDR_e Feature: gene Location: 41204-42538 bp Feature: domain Description: MFS_MucK Location: 41381-42515 bp Feature: domain Description: MFS_MucK Location: 413 81-42515 bp Feature: gene Location: 42713-44005 bp Feature: domain Description: Histone_HNS Location: 43697-43934 bp Feature: domain Description: Histone_HNS Location: 43 697-43 93 4 bp Feature: gene Location: 43408-44868 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43984-44620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43 984-44620 bp Feature: gene Location: 44991-45563 bp Feature: domain Description: FIN Location: 45171-45528 bp Feature: domain Description: FIN Location: 45171-45528 bp Feature: gene Location: 45727-46767 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 45841-46732 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 45841-4673 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), dTDP_HR_like_SDR_e (cd05254)