myRT

myRT report for GCA_902830385.1_ASM90283038v1

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Seq: CADETN010000009.1 TPA_asm: Burkholderia cenocepacia strain BCC0048 genome assembly, contig: B_cenocepacia_BCC0048_ERS784998_SC_contig000009, whole genome shotgun sequence (304839 bp)
Overview 1 RT 1: 175631-181124 bp Neighborhood of RT #1 [175631, 181147] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 175631-176548 bp Feature: domain Description: his_ut_repres Location: 175871-176543 bp Feature: domain Description: his_ut_repres Location: 1 75871 -1 76543 bp Feature: gene Location: 176867-177355 bp Feature: domain Description: FIN Location: 176969-177320 bp Feature: domain Description: FIN Location: 1 76969-1 77320 bp Feature: gene Location: 177498-178958 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178074-178710 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 78074-1 7871 0 bp Feature: gene Location: 179263-179613 bp Feature: domain Description: Histone_HNS Location: 179305-179542 bp Feature: domain Description: Histone_HNS Location: 1 79305-1 79542 bp Feature: gene Location: 179900-181147 bp Feature: domain Description: MFS_MucK Location: 179990-181124 bp Feature: domain Description: MFS_MucK Location: 1 79990-1 81 1 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADETN010000015.1 TPA_asm: Burkholderia cenocepacia strain BCC0048 genome assembly, contig: B_cenocepacia_BCC0048_ERS784998_SC_contig000015, whole genome shotgun sequence (213362 bp)
Overview 1 RT 1: 150282-155889 bp Neighborhood of RT #1 [150282, 156011] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 150282-150803 bp Feature: domain Description: YeaK Location: 150303-150759 bp Feature: domain Description: YeaK Location: 150303-150759 bp Feature: gene Location: 151210-152793 bp Feature: domain Description: PRK06498 Location: 151213-152791 bp Feature: domain Description: PRK06498 Location: 1512 13-152 791 bp Feature: gene Location: 153602-154633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153605-154202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153605-1542 02 bp Feature: domain Description: GIIM Note: maturase Location: 154253-154457 bp Feature: domain Description: GIIM Note: maturase Location: 1542 53-154457 bp Feature: gene Location: 154730-155446 bp Feature: domain Description: EthD Location: 154796-154982 bp Feature: domain Description: EthD Location: 154796-154982 bp Feature: domain Description: EthD Location: 155120-155393 bp Feature: domain Description: EthD Location: 15512 0-155393 bp Feature: gene Location: 155499-156011 bp Feature: domain Description: SnoaL_4 Location: 155520-155889 bp Feature: domain Description: SnoaL_4 Location: 15552 0-155889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: CADETN010000023.1 TPA_asm: Burkholderia cenocepacia strain BCC0048 genome assembly, contig: B_cenocepacia_BCC0048_ERS784998_SC_contig000023, whole genome shotgun sequence (126041 bp)
Overview 1 RT 1: 233-3887 bp Neighborhood of RT #1 [233, 3952] RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 233-1558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1112 bp Feature: domain Description: GIIM Note: maturase Location: 1163-1373 bp Feature: domain Description: GIIM Note: maturase Location: 1163 -13 73 bp Feature: gene Location: 1648-2253 bp Feature: domain Description: AcrR Location: 1663-2239 bp Feature: domain Description: AcrR Location: 1663 -223 9 bp Feature: gene Location: 2432-3952 bp Feature: domain Description: MFS_MMR_MDR_like Location: 2474-3887 bp Feature: domain Description: MFS_MMR_MDR_like Location: 2474-3 887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII, GIIM (pfam08388), MFS_MMR_MDR_like (cd17504)

Seq: CADETN010000038.1 TPA_asm: Burkholderia cenocepacia strain BCC0048 genome assembly, contig: B_cenocepacia_BCC0048_ERS784998_SC_contig000038, whole genome shotgun sequence (52148 bp)
Overview 1 RT 1: 32676-37905 bp Neighborhood of RT #1 [32676, 38093] KfrB KfrA_N RVT-GII GIIM parB_part KorB_C ParAB_family Feature: gene Location: 32676-33023 bp Feature: domain Description: KfrB Location: 32682-32859 bp Feature: domain Description: KfrB Location: 32682-32859 bp Feature: gene Location: 33194-34225 bp Feature: domain Description: KfrA_N Location: 33209-33551 bp Feature: domain Description: KfrA_N Location: 33209-33551 bp Feature: gene Location: 34403-35890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34826-35444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 826-354 4 4 bp Feature: domain Description: GIIM Note: maturase Location: 35495-35708 bp Feature: domain Description: GIIM Note: maturase Location: 354 95-35708 bp Feature: gene Location: 36283-37332 bp Feature: domain Description: parB_part Location: 36412-36952 bp Feature: domain Description: parB_part Location: 364 12-36952 bp Feature: domain Description: KorB_C Location: 37156-37330 bp Feature: domain Description: KorB_C Location: 37156-37330 bp Feature: gene Location: 37329-38093 bp Feature: domain Description: ParAB_family Location: 37335-37905 bp Feature: domain Description: ParAB_family Location: 37335-37905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KfrB (pfam18790), KfrA_N (pfam11740), RVT-GII, GIIM (pfam08388), parB_part (TIGR00180), KorB_C (pfam06613), ParAB_family (cd02042)