myRT

myRT report for GCA_902830405.1_ASM90283040v1

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Seq: CADETP010000005.1 TPA_asm: Burkholderia cenocepacia strain BCC0127 genome assembly, contig: B_cenocepacia_BCC0127_ERS785018_SC_contig000005, whole genome shotgun sequence (508938 bp)
Overview 1 RT 1: 505070-508074 bp Neighborhood of RT #1 [505070, 508232] Gmd GDP_MD_SDR_e RVT-GII GIIM Feature: gene Location: 505070-506116 bp Feature: domain Description: Gmd Location: 505085-506102 bp Feature: domain Description: Gmd Location: 505085-5061 02 bp Feature: gene Location: 506178-507068 bp Feature: domain Description: GDP_MD_SDR_e Location: 506181-507036 bp Feature: domain Description: GDP_MD_SDR_e Location: 5061 81 -507036 bp Feature: gene Location: 507189-508232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507198-507813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5071 98-50781 3 bp Feature: domain Description: GIIM Note: maturase Location: 507873-508074 bp Feature: domain Description: GIIM Note: maturase Location: 507873-508074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388)

Seq: CADETP010000008.1 TPA_asm: Burkholderia cenocepacia strain BCC0127 genome assembly, contig: B_cenocepacia_BCC0127_ERS785018_SC_contig000008, whole genome shotgun sequence (365346 bp)
Overview 1 RT 1: 229049-234433 bp Neighborhood of RT #1 [229049, 234438] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 229049-230296 bp Feature: domain Description: MFS_MucK Location: 229139-230273 bp Feature: domain Description: MFS_MucK Location: 2 2 9139-2 302 73 bp Feature: gene Location: 230583-230912 bp Feature: domain Description: Histone_HNS Location: 230604-230841 bp Feature: domain Description: Histone_HNS Location: 2 30604-2 30841 bp Feature: gene Location: 231232-232581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 231697-232333 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 31697-2 32 333 bp Feature: gene Location: 232834-233406 bp Feature: domain Description: FIN Location: 233014-233371 bp Feature: domain Description: FIN Location: 2 33014-2 33371 bp Feature: gene Location: 233629-234438 bp Feature: domain Description: his_ut_repres Location: 233761-234433 bp Feature: domain Description: his_ut_repres Location: 2 33761-2 34433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)