myRT

myRT report for GCA_902830435.1_ASM90283043v1

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Seq: CADETL010000016.1 TPA_asm: Burkholderia cenocepacia strain BCC0017 genome assembly, contig: B_cenocepacia_BCC0017_ERS785082_SC_contig000016, whole genome shotgun sequence (177151 bp)
Overview 1 RT 1: 114063-119670 bp Neighborhood of RT #1 [114063, 119792] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114063-114584 bp Feature: domain Description: YeaK Location: 114084-114540 bp Feature: domain Description: YeaK Location: 1 1 4084-1 1 4540 bp Feature: gene Location: 114991-116574 bp Feature: domain Description: PRK06498 Location: 114994-116572 bp Feature: domain Description: PRK06498 Location: 1 1 4994-1 1 6572 bp Feature: gene Location: 117383-118414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117386-117983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7386-1 1 7983 bp Feature: domain Description: GIIM Note: maturase Location: 118034-118238 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8034-1 1 8238 bp Feature: gene Location: 118511-119227 bp Feature: domain Description: EthD Location: 118577-118763 bp Feature: domain Description: EthD Location: 1 1 8577-1 1 8763 bp Feature: domain Description: EthD Location: 118901-119174 bp Feature: domain Description: EthD Location: 1 1 8901 -1 1 91 74 bp Feature: gene Location: 119280-119792 bp Feature: domain Description: SnoaL_4 Location: 119301-119670 bp Feature: domain Description: SnoaL_4 Location: 1 1 9301 -1 1 9670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: CADETL010000020.1 TPA_asm: Burkholderia cenocepacia strain BCC0017 genome assembly, contig: B_cenocepacia_BCC0017_ERS785082_SC_contig000020, whole genome shotgun sequence (163474 bp)
Overview 1 RT 1: 124366-129877 bp Neighborhood of RT #1 [124366, 129882] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 124366-125613 bp Feature: domain Description: MFS_MucK Location: 124456-125590 bp Feature: domain Description: MFS_MucK Location: 12 4456-12 5590 bp Feature: gene Location: 125900-126229 bp Feature: domain Description: Histone_HNS Location: 125921-126158 bp Feature: domain Description: Histone_HNS Location: 12 592 1-12 6158 bp Feature: gene Location: 126555-128015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127131-127767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7131-12 7767 bp Feature: gene Location: 128158-128730 bp Feature: domain Description: FIN Location: 128344-128695 bp Feature: domain Description: FIN Location: 12 8344-12 8695 bp Feature: gene Location: 128965-129882 bp Feature: domain Description: his_ut_repres Location: 129205-129877 bp Feature: domain Description: his_ut_repres Location: 12 92 05-12 9877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADETL010000024.1 TPA_asm: Burkholderia cenocepacia strain BCC0017 genome assembly, contig: B_cenocepacia_BCC0017_ERS785082_SC_contig000024, whole genome shotgun sequence (127387 bp)
Overview 1 RT 1: 298-5223 bp Neighborhood of RT #1 [298, 5288] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 298-1332 bp Feature: domain Description: COG3547 Location: 313-1276 bp Feature: domain Description: COG3 547 Location: 3 13 -1276 bp Feature: gene Location: 1569-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830-2448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 0-2448 bp Feature: domain Description: GIIM Note: maturase Location: 2499-2709 bp Feature: domain Description: GIIM Note: maturase Location: 2499-2709 bp Feature: gene Location: 2984-3589 bp Feature: domain Description: AcrR Location: 2999-3575 bp Feature: domain Description: AcrR Location: 2999-3 575 bp Feature: gene Location: 3768-5288 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3810-5223 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 810-5223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)