myRT

myRT report for GCA_902830455.1_ASM90283045v1

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Seq: CADETK010000009.1 TPA_asm: Burkholderia cenocepacia strain BCC0107 genome assembly, contig: B_cenocepacia_BCC0107_ERS785010_SC_contig000009, whole genome shotgun sequence (304842 bp)
Overview 1 RT 1: 175630-181123 bp Neighborhood of RT #1 [175630, 181146] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 175630-176547 bp Feature: domain Description: his_ut_repres Location: 175870-176542 bp Feature: domain Description: his_ut_repres Location: 1 75870-1 76542 bp Feature: gene Location: 176866-177354 bp Feature: domain Description: FIN Location: 176968-177319 bp Feature: domain Description: FIN Location: 1 76968-1 7731 9 bp Feature: gene Location: 177497-178957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178073-178709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 78073-1 78709 bp Feature: gene Location: 179262-179612 bp Feature: domain Description: Histone_HNS Location: 179304-179541 bp Feature: domain Description: Histone_HNS Location: 1 79304-1 79541 bp Feature: gene Location: 179899-181146 bp Feature: domain Description: MFS_MucK Location: 179989-181123 bp Feature: domain Description: MFS_MucK Location: 1 79989-1 81 1 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADETK010000020.1 TPA_asm: Burkholderia cenocepacia strain BCC0107 genome assembly, contig: B_cenocepacia_BCC0107_ERS785010_SC_contig000020, whole genome shotgun sequence (177352 bp)
Overview 1 RT 1: 114268-119875 bp Neighborhood of RT #1 [114268, 119997] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114268-114789 bp Feature: domain Description: YeaK Location: 114289-114745 bp Feature: domain Description: YeaK Location: 1142 89-114745 bp Feature: gene Location: 115196-116779 bp Feature: domain Description: PRK06498 Location: 115199-116777 bp Feature: domain Description: PRK06498 Location: 115199-116777 bp Feature: gene Location: 117588-118619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117591-118188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117591-118188 bp Feature: domain Description: GIIM Note: maturase Location: 118239-118443 bp Feature: domain Description: GIIM Note: maturase Location: 1182 39-118443 bp Feature: gene Location: 118716-119432 bp Feature: domain Description: EthD Location: 118782-118968 bp Feature: domain Description: EthD Location: 118782 -118968 bp Feature: domain Description: EthD Location: 119106-119379 bp Feature: domain Description: EthD Location: 119106-119379 bp Feature: gene Location: 119485-119997 bp Feature: domain Description: SnoaL_4 Location: 119506-119875 bp Feature: domain Description: SnoaL_4 Location: 119506-119875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: CADETK010000025.1 TPA_asm: Burkholderia cenocepacia strain BCC0107 genome assembly, contig: B_cenocepacia_BCC0107_ERS785010_SC_contig000025, whole genome shotgun sequence (125965 bp)
Overview 1 RT 1: 122010-125475 bp Neighborhood of RT #1 [122010, 125660] MFS_MMR_MDR_like AcrR RVT-GII GIIM Feature: gene Location: 122010-123530 bp Feature: domain Description: MFS_MMR_MDR_like Location: 122052-123465 bp Feature: domain Description: MFS_MMR_MDR_like Location: 122052-123 465 bp Feature: gene Location: 123709-124314 bp Feature: domain Description: AcrR Location: 123724-124300 bp Feature: domain Description: AcrR Location: 123 724-1243 00 bp Feature: gene Location: 124404-125660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124596-125214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124596-125214 bp Feature: domain Description: GIIM Note: maturase Location: 125265-125475 bp Feature: domain Description: GIIM Note: maturase Location: 125265-125475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388)