myRT

myRT report for GCA_902830465.1_ASM90283046v1

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Seq: CADETO010000017.1 TPA_asm: Burkholderia cenocepacia strain BCC0138 genome assembly, contig: B_cenocepacia_BCC0138_ERS785048_SC_contig000017, whole genome shotgun sequence (177034 bp)
Overview 1 RT 1: 113950-119558 bp Neighborhood of RT #1 [113950, 119680] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 113950-114471 bp Feature: domain Description: YeaK Location: 113971-114427 bp Feature: domain Description: YeaK Location: 1 1 3971 -1 1 4427 bp Feature: gene Location: 114878-116461 bp Feature: domain Description: PRK06498 Location: 114881-116459 bp Feature: domain Description: PRK06498 Location: 1 1 4881 -1 1 6459 bp Feature: gene Location: 117271-118302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117274-117871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7274-1 1 7871 bp Feature: domain Description: GIIM Note: maturase Location: 117922-118126 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 7922-1 1 81 26 bp Feature: gene Location: 118399-119115 bp Feature: domain Description: EthD Location: 118465-118651 bp Feature: domain Description: EthD Location: 1 1 8465-1 1 8651 bp Feature: domain Description: EthD Location: 118789-119062 bp Feature: domain Description: EthD Location: 1 1 8789-1 1 9062 bp Feature: gene Location: 119168-119680 bp Feature: domain Description: SnoaL_4 Location: 119189-119558 bp Feature: domain Description: SnoaL_4 Location: 1 1 91 89-1 1 9558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: CADETO010000022.1 TPA_asm: Burkholderia cenocepacia strain BCC0138 genome assembly, contig: B_cenocepacia_BCC0138_ERS785048_SC_contig000022, whole genome shotgun sequence (163464 bp)
Overview 1 RT 1: 124367-129878 bp Neighborhood of RT #1 [124367, 129883] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 124367-125614 bp Feature: domain Description: MFS_MucK Location: 124457-125591 bp Feature: domain Description: MFS_MucK Location: 12 4457-12 5591 bp Feature: gene Location: 125901-126230 bp Feature: domain Description: Histone_HNS Location: 125922-126159 bp Feature: domain Description: Histone_HNS Location: 12 592 2 -12 6159 bp Feature: gene Location: 126556-128016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127132-127768 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7132 -12 7768 bp Feature: gene Location: 128159-128731 bp Feature: domain Description: FIN Location: 128345-128696 bp Feature: domain Description: FIN Location: 12 8345-12 8696 bp Feature: gene Location: 128966-129883 bp Feature: domain Description: his_ut_repres Location: 129206-129878 bp Feature: domain Description: his_ut_repres Location: 12 92 06-12 9878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADETO010000026.1 TPA_asm: Burkholderia cenocepacia strain BCC0138 genome assembly, contig: B_cenocepacia_BCC0138_ERS785048_SC_contig000026, whole genome shotgun sequence (126052 bp)
Overview 1 RT 1: 122093-125558 bp Neighborhood of RT #1 [122093, 125743] MFS_MMR_MDR_like AcrR RVT-GII GIIM Feature: gene Location: 122093-123613 bp Feature: domain Description: MFS_MMR_MDR_like Location: 122135-123548 bp Feature: domain Description: MFS_MMR_MDR_like Location: 12213 5-123 548 bp Feature: gene Location: 123792-124397 bp Feature: domain Description: AcrR Location: 123807-124383 bp Feature: domain Description: AcrR Location: 123 807-1243 83 bp Feature: gene Location: 124487-125743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124679-125297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124679-125297 bp Feature: domain Description: GIIM Note: maturase Location: 125348-125558 bp Feature: domain Description: GIIM Note: maturase Location: 1253 48-125558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388)