myRT

myRT report for GCA_902830515.1_ASM90283051v1

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Seq: CADEUL010000010.1 TPA_asm: Burkholderia cenocepacia strain BCC0313 genome assembly, contig: B_cenocepacia_BCC0313_ERS784920_SC_contig000010, whole genome shotgun sequence (285105 bp)
Overview 1 RT 1: 230913-236279 bp Neighborhood of RT #1 [230913, 236284] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 230913-232160 bp Feature: domain Description: MFS_MucK Location: 231003-232137 bp Feature: domain Description: MFS_MucK Location: 231 003-2321 37 bp Feature: gene Location: 232464-232793 bp Feature: domain Description: Histone_HNS Location: 232485-232722 bp Feature: domain Description: Histone_HNS Location: 232485-232722 bp Feature: gene Location: 233119-234468 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233584-234220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233584-234220 bp Feature: gene Location: 234722-235294 bp Feature: domain Description: FIN Location: 234908-235259 bp Feature: domain Description: FIN Location: 234908-235259 bp Feature: gene Location: 235529-236284 bp Feature: domain Description: his_ut_repres Location: 235607-236279 bp Feature: domain Description: his_ut_repres Location: 235607-236279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADEUL010000031.1 TPA_asm: Burkholderia cenocepacia strain BCC0313 genome assembly, contig: B_cenocepacia_BCC0313_ERS784920_SC_contig000031, whole genome shotgun sequence (71630 bp)
Overview 1 RT 1: 67080-70830 bp Neighborhood of RT #1 [67080, 71261] SRAP RVT-GII Feature: gene Location: 67080-68066 bp Feature: gene Location: 68762-69673 bp Feature: domain Description: SRAP Location: 69122-69638 bp Feature: domain Description: SRAP Location: 6912 2 -69638 bp Feature: gene Location: 69729-71261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70140-70830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70140-70830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII

Seq: CADEUL010000038.1 TPA_asm: Burkholderia cenocepacia strain BCC0313 genome assembly, contig: B_cenocepacia_BCC0313_ERS784920_SC_contig000038, whole genome shotgun sequence (51607 bp)
Overview 1 RT 1: 28180-35186 bp Neighborhood of RT #1 [28180, 35200] ALDH_F7_AASADH COG3547 RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 28180-29820 bp Feature: domain Description: ALDH_F7_AASADH Location: 28363-29779 bp Feature: domain Description: ALDH_F7_AASADH Location: 283 63 -29779 bp Feature: gene Location: 30510-31544 bp Feature: domain Description: COG3547 Location: 30525-31488 bp Feature: domain Description: COG3 547 Location: 3 0525-3 1488 bp Feature: gene Location: 31793-33082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32048-32663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2048-3 2663 bp Feature: domain Description: GIIM Note: maturase Location: 32723-32924 bp Feature: domain Description: GIIM Note: maturase Location: 3 2723 -3 2924 bp Feature: gene Location: 33202-34092 bp Feature: domain Description: GDP_MD_SDR_e Location: 33205-34060 bp Feature: domain Description: GDP_MD_SDR_e Location: 3 3 205-3 4060 bp Feature: gene Location: 34154-35200 bp Feature: domain Description: Gmd Location: 34169-35186 bp Feature: domain Description: Gmd Location: 3 4169-3 5186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F7_AASADH (cd07130), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), GDP_MD_SDR_e (cd05260), Gmd (COG1089)