myRT

myRT report for GCA_902830535.1_ASM90283053v1

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Seq: CADEUH010000005.1 TPA_asm: Burkholderia cenocepacia strain BCC0202 genome assembly, contig: B_cenocepacia_BCC0202_ERS784992_SC_contig000005, whole genome shotgun sequence (596170 bp)
Overview 1 RT 1: 467361-472743 bp Neighborhood of RT #1 [467361, 472748] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 467361-468608 bp Feature: domain Description: MFS_MucK Location: 467451-468585 bp Feature: domain Description: MFS_MucK Location: 467451 -468585 bp Feature: gene Location: 468894-469223 bp Feature: domain Description: Histone_HNS Location: 468915-469152 bp Feature: domain Description: Histone_HNS Location: 46891 5-4691 52 bp Feature: gene Location: 469542-470891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 470007-470643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 470007-470643 bp Feature: gene Location: 471144-471716 bp Feature: domain Description: FIN Location: 471324-471681 bp Feature: domain Description: FIN Location: 471 324-471 681 bp Feature: gene Location: 471939-472748 bp Feature: domain Description: his_ut_repres Location: 472071-472743 bp Feature: domain Description: his_ut_repres Location: 472071 -472743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADEUH010000022.1 TPA_asm: Burkholderia cenocepacia strain BCC0202 genome assembly, contig: B_cenocepacia_BCC0202_ERS784992_SC_contig000022, whole genome shotgun sequence (31716 bp)
Overview 1 RT 1: 88-3768 bp Neighborhood of RT #1 [88, 3836] RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 88-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-958 bp Feature: domain Description: GIIM Note: maturase Location: 1018-1219 bp Feature: domain Description: GIIM Note: maturase Location: 1018-12 19 bp Feature: gene Location: 1925-2536 bp Feature: domain Description: RlpA Location: 1994-2501 bp Feature: domain Description: RlpA Location: 1994-2 501 bp Feature: gene Location: 3192-3836 bp Feature: domain Description: YcbL-like_MBL-fold Location: 3204-3768 bp Feature: domain Description: YcbL-like_MBL-fold Location: 32 04-3768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), YcbL-like_MBL-fold (cd07737), RVT-GII, GIIM (pfam08388)