myRT

myRT report for GCA_902830555.1_ASM90283055v1

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Seq: CADEUD010000002.1 TPA_asm: Burkholderia cenocepacia strain BCC1718 genome assembly, contig: B_cencepacia_BCC1718_ERS785000_SC_contig000002, whole genome shotgun sequence (871307 bp)
Overview 1 RT 1: 487-3881 bp Neighborhood of RT #1 [487, 3895] RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 487-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1 357 bp Feature: domain Description: GIIM Note: maturase Location: 1417-1618 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 7-1 61 8 bp Feature: gene Location: 1897-2787 bp Feature: domain Description: GDP_MD_SDR_e Location: 1900-2755 bp Feature: domain Description: GDP_MD_SDR_e Location: 1 900-2755 bp Feature: gene Location: 2849-3895 bp Feature: domain Description: Gmd Location: 2864-3881 bp Feature: domain Description: Gmd Location: 2864-3881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_MD_SDR_e (cd05260), Gmd (COG1089), RVT-GII, GIIM (pfam08388)

Seq: CADEUD010000008.1 TPA_asm: Burkholderia cenocepacia strain BCC1718 genome assembly, contig: B_cencepacia_BCC1718_ERS785000_SC_contig000008, whole genome shotgun sequence (469409 bp)
Overview 1 RT 1: 332940-338324 bp Neighborhood of RT #1 [332940, 338329] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 332940-334187 bp Feature: domain Description: MFS_MucK Location: 333030-334164 bp Feature: domain Description: MFS_MucK Location: 333030-334164 bp Feature: gene Location: 334474-334803 bp Feature: domain Description: Histone_HNS Location: 334495-334732 bp Feature: domain Description: Histone_HNS Location: 334495-334732 bp Feature: gene Location: 335123-336472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 335588-336224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 335588-3362 2 4 bp Feature: gene Location: 336725-337297 bp Feature: domain Description: FIN Location: 336905-337262 bp Feature: domain Description: FIN Location: 336905-3372 62 bp Feature: gene Location: 337520-338329 bp Feature: domain Description: his_ut_repres Location: 337652-338324 bp Feature: domain Description: his_ut_repres Location: 337652 -33832 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)