myRT

myRT report for GCA_902830565.1_ASM90283056v1

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Seq: CADEUF010000003.1 TPA_asm: Burkholderia cenocepacia strain BCC0451 genome assembly, contig: B_cenocepacia_BCC0451_ERS784950_SC_contig000003, whole genome shotgun sequence (1207947 bp)
Overview 1 RT 1: 69764-74262 bp 2 RT 2: 131969-138447 bp 3 RT 3: 1074666-1080049 bp Neighborhood of RT #1 [69764, 74273] MFS_1 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [131969, 138449] HTH_LUXR gram_neg_porins RVT-GII ARO8 MSMEG_0572_fam Neighborhood of RT #3 [1074666, 1080054] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 69764-70702 bp Feature: domain Description: MFS_1 Location: 69767-70448 bp Feature: domain Description: MFS_1 Location: 69767-70448 bp Feature: gene Location: 70793-71251 bp Feature: domain Description: PHA02517 Location: 70796-71243 bp Feature: domain Description: PHA0251 7 Location: 70796-71 243 bp Feature: gene Location: 71377-72579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71380-72058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 380-72058 bp Feature: domain Description: GIIM Note: maturase Location: 72154-72343 bp Feature: domain Description: GIIM Note: maturase Location: 721 54-72343 bp Feature: gene Location: 73540-73848 bp Feature: domain Description: PHA02517 Location: 73546-73813 bp Feature: domain Description: PHA0251 7 Location: 73546-7381 3 bp Feature: gene Location: 73995-74273 bp Feature: domain Description: InsE Location: 74043-74262 bp Feature: domain Description: InsE Location: 74043-74262 bp Feature: gene Location: 131969-132706 bp Feature: domain Description: HTH_LUXR Location: 132509-132674 bp Feature: domain Description: HTH_LUXR Location: 1 32509-1 32674 bp Feature: gene Location: 133163-134221 bp Feature: domain Description: gram_neg_porins Location: 133235-134219 bp Feature: domain Description: gram_neg_porins Location: 1 33235-1 3421 9 bp Feature: gene Location: 134779-136056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134989-135676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 34989-1 35676 bp Feature: gene Location: 136194-137585 bp Feature: domain Description: ARO8 Location: 136248-137556 bp Feature: domain Description: ARO8 Location: 1 36248-1 37556 bp Feature: gene Location: 137967-138449 bp Feature: domain Description: MSMEG_0572_fam Location: 137973-138447 bp Feature: domain Description: MSMEG_0572_fam Location: 1 37973-1 38447 bp Feature: gene Location: 1074666-1075913 bp Feature: domain Description: MFS_MucK Location: 1074756-1075890 bp Feature: domain Description: MFS_MucK Location: 1 074756-1 075890 bp Feature: gene Location: 1076199-1076528 bp Feature: domain Description: Histone_HNS Location: 1076220-1076457 bp Feature: domain Description: Histone_HNS Location: 1 076220-1 076457 bp Feature: gene Location: 1076847-1078196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1077312-1077948 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 07731 2-1 077948 bp Feature: gene Location: 1078450-1079022 bp Feature: domain Description: FIN Location: 1078630-1078987 bp Feature: domain Description: FIN Location: 1 078630-1 078987 bp Feature: gene Location: 1079245-1080054 bp Feature: domain Description: his_ut_repres Location: 1079377-1080049 bp Feature: domain Description: his_ut_repres Location: 1 079377-1 080049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_1 (pfam07690), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), HTH_LUXR (smart00421), gram_neg_porins (cd00342), ARO8 (COG1167), MSMEG_0572_fam (TIGR04044), MFS_MucK (cd17371)
Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)