myRT

myRT report for GCA_902830585.1_ASM90283058v1

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Seq: CADEUG010000001.1 TPA_asm: Burkholderia cenocepacia strain BCC0999 genome assembly, contig: B_cenocepacia_BCC0999_ERS784803_SC_contig000001, whole genome shotgun sequence (805655 bp)
Overview 1 RT 1: 663760-669143 bp Neighborhood of RT #1 [663760, 669148] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 663760-665007 bp Feature: domain Description: MFS_MucK Location: 663850-664984 bp Feature: domain Description: MFS_MucK Location: 663850-664984 bp Feature: gene Location: 665293-665622 bp Feature: domain Description: Histone_HNS Location: 665314-665551 bp Feature: domain Description: Histone_HNS Location: 66531 4-665551 bp Feature: gene Location: 665942-667291 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 666407-667043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 666407-667043 bp Feature: gene Location: 667544-668116 bp Feature: domain Description: FIN Location: 667724-668081 bp Feature: domain Description: FIN Location: 667724-668081 bp Feature: gene Location: 668339-669148 bp Feature: domain Description: his_ut_repres Location: 668471-669143 bp Feature: domain Description: his_ut_repres Location: 668471 -6691 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CADEUG010000030.1 TPA_asm: Burkholderia cenocepacia strain BCC0999 genome assembly, contig: B_cenocepacia_BCC0999_ERS784803_SC_contig000030, whole genome shotgun sequence (102890 bp)
Overview 1 RT 1: 89-3757 bp Neighborhood of RT #1 [89, 3825] RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 89-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-893 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: gene Location: 1914-2525 bp Feature: domain Description: RlpA Location: 1983-2490 bp Feature: domain Description: RlpA Location: 1983-2 490 bp Feature: gene Location: 3181-3825 bp Feature: domain Description: YcbL-like_MBL-fold Location: 3193-3757 bp Feature: domain Description: YcbL-like_MBL-fold Location: 3193-3757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), YcbL-like_MBL-fold (cd07737), RVT-GII, GIIM (pfam08388)

Seq: CADEUG010000037.1 TPA_asm: Burkholderia cenocepacia strain BCC0999 genome assembly, contig: B_cenocepacia_BCC0999_ERS784803_SC_contig000037, whole genome shotgun sequence (44190 bp)
Overview 1 RT 1: 89-2829 bp Neighborhood of RT #1 [89, 2888] RVT-GII RVT-GII GIIM IclR Feature: gene Location: 89-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-3 89 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527-749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527-749 bp Feature: domain Description: GIIM Note: maturase Location: 809-1010 bp Feature: domain Description: GIIM Note: maturase Location: 809-1010 bp Feature: gene Location: 665-1399 bp Feature: gene Location: 2007-2888 bp Feature: domain Description: IclR Location: 2088-2829 bp Feature: domain Description: IclR Location: 2088-2829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IclR (pfam01614), RVT-GII, GIIM (pfam08388)