myRT

myRT report for GCA_902830615.1_ASM90283061v1

Download annotations/find similar RTs

Seq: CADEUN010000005.1 TPA_asm: Burkholderia cepacia strain BCC0196 genome assembly, contig: B_cepacia_BCC0196_ERS784922_SC_contig000005, whole genome shotgun sequence (484352 bp)
Overview 1 RT 1: 5697-10993 bp Neighborhood of RT #1 [5697, 11016] FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 5697-5969 bp Feature: gene Location: 6595-7167 bp Feature: domain Description: FIN Location: 6772-7129 bp Feature: domain Description: FIN Location: 6772-71 29 bp Feature: gene Location: 7310-8770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7886-8522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7886-8522 bp Feature: gene Location: 9121-9471 bp Feature: domain Description: Histone_HNS Location: 9163-9400 bp Feature: domain Description: Histone_HNS Location: 91 63-9400 bp Feature: gene Location: 9781-11016 bp Feature: domain Description: MFS_MucK Location: 9859-10993 bp Feature: domain Description: MFS_MucK Location: 9859-1 0993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADEUN010000014.1 TPA_asm: Burkholderia cepacia strain BCC0196 genome assembly, contig: B_cepacia_BCC0196_ERS784922_SC_contig000014, whole genome shotgun sequence (207113 bp)
Overview 1 RT 1: 35415-39179 bp Neighborhood of RT #1 [35415, 39179] Prim_Zn_Ribbon Toprim_3 RVT-GII GIIM Feature: gene Location: 35415-36557 bp Feature: domain Description: Prim_Zn_Ribbon Location: 35523-35622 bp Feature: domain Description: Prim_Zn_Ribbon Location: 3552 3-3562 2 bp Feature: domain Description: Toprim_3 Location: 36144-36435 bp Feature: domain Description: Toprim_3 Location: 36144-36435 bp Feature: gene Location: 36654-36878 bp Feature: gene Location: 37310-38689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37655-38270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37655-382 70 bp Feature: domain Description: GIIM Note: maturase Location: 38327-38549 bp Feature: domain Description: GIIM Note: maturase Location: 3832 7-38549 bp Feature: gene Location: 38779-39033 bp Feature: gene Location: 39030-39179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362), RVT-GII, GIIM (pfam08388)