myRT

myRT report for GCA_902830775.1_ASM90283077v1

Download annotations/find similar RTs

Seq: CADEVA010000010.1 TPA_asm: Burkholderia contaminans strain BCC0132 genome assembly, contig: B_cenocepacia_BCC0132_ERS785057_SC_contig000010, whole genome shotgun sequence (211597 bp)
Overview 1 RT 1: 13827-19530 bp 2 RT 2: 207198-211582 bp Neighborhood of RT #1 [13827, 19535] HpnB RVT-GII GIIM ABC_SMC_barmotin HpnA Neighborhood of RT #2 [207198, 211596] FGase gram_neg_porins RVT-GII IS285 Feature: gene Location: 13827-15014 bp Feature: domain Description: HpnB Location: 13848-15000 bp Feature: domain Description: HpnB Location: 1 3848-1 5000 bp Feature: gene Location: 15408-15587 bp Feature: gene Location: 15645-16844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15810-16425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 581 0-1 6425 bp Feature: domain Description: GIIM Note: maturase Location: 16482-16686 bp Feature: domain Description: GIIM Note: maturase Location: 1 6482-1 6686 bp Feature: gene Location: 16971-18419 bp Feature: domain Description: ABC_SMC_barmotin Location: 17043-18096 bp Feature: domain Description: ABC_SMC_barmotin Location: 1 7043-1 8096 bp Feature: gene Location: 18528-19535 bp Feature: domain Description: HpnA Location: 18555-19530 bp Feature: domain Description: HpnA Location: 1 8555-1 9530 bp Feature: gene Location: 207198-208097 bp Feature: domain Description: FGase Location: 207282-207975 bp Feature: domain Description: FGase Location: 207282-207975 bp Feature: gene Location: 208447-209550 bp Feature: domain Description: gram_neg_porins Location: 208525-209548 bp Feature: domain Description: gram_neg_porins Location: 208525-209548 bp Feature: gene Location: 209908-211353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210319-211006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 031 9-21 1 006 bp Feature: gene Location: 211360-211596 bp Feature: domain Description: IS285 Location: 211366-211582 bp Feature: domain Description: IS285 Location: 21 1 366-21 1 582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HpnB (TIGR03469), RVT-GII, GIIM (pfam08388), ABC_SMC_barmotin (cd03278), HpnA (TIGR03466), FGase (pfam05013), gram_neg_porins (cd00342), IS285 (COG3328)

Seq: CADEVA010000014.1 TPA_asm: Burkholderia contaminans strain BCC0132 genome assembly, contig: B_cenocepacia_BCC0132_ERS785057_SC_contig000014, whole genome shotgun sequence (156522 bp)
Overview 1 RT 1: 114226-119553 bp Neighborhood of RT #1 [114226, 119553] MFS_MucK Histone_HNS RVT-Retrons FIN Feature: gene Location: 114226-115422 bp Feature: domain Description: MFS_MucK Location: 114265-115399 bp Feature: domain Description: MFS_MucK Location: 1142 65-115399 bp Feature: gene Location: 115774-116103 bp Feature: domain Description: Histone_HNS Location: 115795-116032 bp Feature: domain Description: Histone_HNS Location: 115795-116032 bp Feature: gene Location: 116431-117780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116896-117532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116896-117532 bp Feature: gene Location: 118046-118618 bp Feature: domain Description: FIN Location: 118223-118583 bp Feature: domain Description: FIN Location: 1182 2 3-118583 bp Feature: gene Location: 119281-119553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)

Seq: CADEVA010000108.1 TPA_asm: Burkholderia contaminans strain BCC0132 genome assembly, contig: B_cenocepacia_BCC0132_ERS785057_SC_contig000108, whole genome shotgun sequence (5542 bp)
Overview 1 RT 1: 3053-5311 bp Neighborhood of RT #1 [3053, 5349] RVT-UG2 Abi_C Feature: gene Location: 3053-3298 bp Feature: gene Location: 3450-3743 bp Feature: gene Location: 3815-5086 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4013-4796 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4013 -4796 bp Feature: gene Location: 5107-5349 bp Feature: domain Description: Abi_C Location: 5110-5311 bp Feature: domain Description: Abi_C Location: 5110-53 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, Abi_C (pfam14355)