myRT

myRT report for GCA_902831705.1_ASM90283170v1

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Seq: CADEYR010000007.1 TPA_asm: Burkholderia gladioli strain BCC1729 genome assembly, contig: B_gladioli_BCC1729_ERS784902_SC_contig000007, whole genome shotgun sequence (593413 bp)
Overview 1 RT 1: 221738-225711 bp Neighborhood of RT #1 [221738, 225734] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 221738-222925 bp Feature: gene Location: 222930-223508 bp Feature: gene Location: 223530-224831 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 223899-224586 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 223899-224586 bp Feature: gene Location: 224878-225255 bp Feature: domain Description: Avd_like Location: 224905-225211 bp Feature: domain Description: Avd_like Location: 224905-22521 1 bp Feature: gene Location: 225270-225734 bp Feature: domain Description: DUF1566 Location: 225492-225711 bp Feature: domain Description: DUF1 566 Location: 225492-22571 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: CADEYR010000010.1 TPA_asm: Burkholderia gladioli strain BCC1729 genome assembly, contig: B_gladioli_BCC1729_ERS784902_SC_contig000010, whole genome shotgun sequence (316040 bp)
Overview 1 RT 1: 220923-225780 bp Neighborhood of RT #1 [220923, 225890] PRK09413 PRK14702 RVT-GII GIIM YtcJ_like Feature: gene Location: 220923-221318 bp Feature: domain Description: PRK09413 Location: 220971-221313 bp Feature: domain Description: PRK09413 Location: 2 2 0971-2 2 1313 bp Feature: gene Location: 221423-222157 bp Feature: domain Description: PRK14702 Location: 221444-222143 bp Feature: domain Description: PRK14702 Location: 2 2 1444-2 2 2 143 bp Feature: gene Location: 222168-223247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222228-222891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 2 2 8-2 2 2 891 bp Feature: domain Description: GIIM Note: maturase Location: 222960-223176 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 2 960-2 2 3176 bp Feature: gene Location: 223551-223853 bp Feature: gene Location: 224061-225890 bp Feature: domain Description: YtcJ_like Location: 224211-225780 bp Feature: domain Description: YtcJ_like Location: 2 2 42 11-2 2 5780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), PRK14702 (insertion element IS2 transposase InsD; Provisional), RVT-GII, GIIM (pfam08388), YtcJ_like (cd01300)