myRT

myRT report for GCA_902831725.1_ASM90283172v1

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Seq: CADEZH010000014.1 TPA_asm: Burkholderia gladioli strain BCC1776 genome assembly, contig: Burkholderia_gladioli_BCC1776_NODE_14_length_267166_cov_3.0591_pilon, whole genome shotgun sequence (267166 bp)
Overview 1 RT 1: 167049-172678 bp Neighborhood of RT #1 [167049, 172695] PRK02304 recJ ssDNA-exonuc_C RVT-GII group_II_RT_mat recJ Feature: gene Location: 167049-167561 bp Feature: domain Description: PRK02304 Location: 167052-167559 bp Feature: domain Description: PRK02304 Location: 1 67052-1 67559 bp Feature: gene Location: 167552-169615 bp Feature: domain Description: recJ Location: 167555-168941 bp Feature: domain Description: recJ Location: 1 67555-1 68941 bp Feature: domain Description: ssDNA-exonuc_C Location: 168959-169559 bp Feature: domain Description: ssDNA-exonuc_C Location: 1 68959-1 69559 bp Feature: gene Location: 170073-171173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170082-170628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70082-1 70628 bp Feature: gene Location: 171333-171680 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 171492-171678 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 71 492-1 71 678 bp Feature: gene Location: 172402-172695 bp Feature: domain Description: recJ Location: 172489-172678 bp Feature: domain Description: recJ Location: 1 72489-1 72678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02304 (adenine phosphoribosyltransferase; Provisional), recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: CADEZH010000022.1 TPA_asm: Burkholderia gladioli strain BCC1776 genome assembly, contig: Burkholderia_gladioli_BCC1776_NODE_22_length_221107_cov_3.55299_pilon, whole genome shotgun sequence (221107 bp)
Overview 1 RT 1: 20049-23201 bp Neighborhood of RT #1 [20049, 23201] DUF1040 RVT-GII GIIM GIIM Feature: gene Location: 20049-20282 bp Feature: domain Description: DUF1040 Location: 20142-20250 bp Feature: domain Description: DUF1040 Location: 2 0142 -2 02 50 bp Feature: gene Location: 20350-20490 bp Feature: gene Location: 20789-22339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21134-21758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1134-2 1758 bp Feature: domain Description: GIIM Note: maturase Location: 21830-21956 bp Feature: domain Description: GIIM Note: maturase Location: 2 1830-2 1956 bp Feature: domain Description: GIIM Note: maturase Location: 22013-22121 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 013-2 2 12 1 bp Feature: gene Location: 22459-22962 bp Feature: gene Location: 22962-23201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1040 (pfam06288), RVT-GII, GIIM (pfam08388)

Seq: CADEZH010000062.1 TPA_asm: Burkholderia gladioli strain BCC1776 genome assembly, contig: Burkholderia_gladioli_BCC1776_NODE_62_length_58031_cov_9.4193_pilon, whole genome shotgun sequence (58031 bp)
Overview 1 RT 1: 51954-57112 bp Neighborhood of RT #1 [51954, 57135] RVT-GII GIIM YitT_membrane spore_ylxY Feature: gene Location: 51954-52172 bp Feature: gene Location: 52474-52659 bp Feature: gene Location: 53307-54572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53508-54126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 508-54126 bp Feature: domain Description: GIIM Note: maturase Location: 54180-54402 bp Feature: domain Description: GIIM Note: maturase Location: 54180-54402 bp Feature: gene Location: 55653-56222 bp Feature: domain Description: YitT_membrane Location: 55677-56208 bp Feature: domain Description: YitT_membrane Location: 55677-56208 bp Feature: gene Location: 56386-57135 bp Feature: domain Description: spore_ylxY Location: 56554-57112 bp Feature: domain Description: spore_ylxY Location: 56554-57112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YitT_membrane (pfam02588), spore_ylxY (TIGR02873)

Seq: CADEZH010000064.1 TPA_asm: Burkholderia gladioli strain BCC1776 genome assembly, contig: Burkholderia_gladioli_BCC1776_NODE_64_length_54931_cov_9.32095_pilon, whole genome shotgun sequence (54931 bp)
Overview 1 RT 1: 4234-9355 bp 2 RT 2: 18947-37954 bp Neighborhood of RT #1 [4234, 9417] Ssb RVT-GII HNHc Cyt_C5_DNA_methylase Neighborhood of RT #2 [18947, 37954] RVT-GII GIIM RAYT DUF4145 RVT-GII GIIM DEXHc_Mot1 RVT-GII HNHc RVT-GII Intron_maturas2 KOG4768 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 4234-4638 bp Feature: domain Description: Ssb Location: 4237-4603 bp Feature: domain Description: Ssb Location: 4 237-4 603 bp Feature: gene Location: 4907-5146 bp Feature: gene Location: 5439-7238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5733-6435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5733-64 35 bp Feature: domain Description: HNHc Note: nucleases Location: 6978-7122 bp Feature: domain Description: HNHc Note: nucleases Location: 6978-7122 bp Feature: gene Location: 7592-8401 bp Feature: gene Location: 8404-9417 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 8419-9355 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 84 19-9355 bp Feature: gene Location: 18947-19117 bp Feature: gene Location: 19555-19728 bp Feature: gene Location: 19798-21042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20002-20656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20002-20656 bp Feature: domain Description: GIIM Note: maturase Location: 20740-20953 bp Feature: domain Description: GIIM Note: maturase Location: 2074 0-20953 bp Feature: gene Location: 21053-21547 bp Feature: domain Description: RAYT Location: 21125-21491 bp Feature: domain Description: RAYT Location: 21125-214 91 bp Feature: gene Location: 21736-21942 bp Feature: domain Description: DUF4145 Location: 21739-21928 bp Feature: domain Description: DUF4 14 5 Location: 21739-21928 bp Feature: gene Location: 22988-23233 bp Feature: gene Location: 23302-24240 bp Feature: gene Location: 24989-26854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25289-25994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25289-25994 bp Feature: domain Description: GIIM Note: maturase Location: 26081-26264 bp Feature: domain Description: GIIM Note: maturase Location: 26081-26264 bp Feature: gene Location: 27132-27932 bp Feature: domain Description: DEXHc_Mot1 Location: 27165-27411 bp Feature: domain Description: DEXHc_Mot1 Location: 27165-274 11 bp Feature: gene Location: 28610-30424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28925-29627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28925-29627 bp Feature: domain Description: HNHc Note: nucleases Location: 30155-30305 bp Feature: domain Description: HNHc Note: nucleases Location: 30155-30305 bp Feature: gene Location: 31229-32761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31496-32327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314 96-32327 bp Feature: domain Description: Intron_maturas2 Location: 32399-32702 bp Feature: domain Description: Intron_maturas2 Location: 32399-32702 bp Feature: gene Location: 32798-33061 bp Feature: domain Description: KOG4768 Location: 32867-33056 bp Feature: domain Description: KOG4 768 Location: 32867-33056 bp Feature: gene Location: 33222-33998 bp Feature: gene Location: 34572-36386 bp Feature: RT Description: RVT_N Location: 34626-34872 bp Feature: RT Description: RVT_N Location: 34 626-34 872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34926-35580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 926-35580 bp Feature: domain Description: GIIM Note: maturase Location: 35643-35877 bp Feature: domain Description: GIIM Note: maturase Location: 3564 3-35877 bp Feature: domain Description: HNHc Note: nucleases Location: 36090-36237 bp Feature: domain Description: HNHc Note: nucleases Location: 36090-36237 bp Feature: gene Location: 36502-37215 bp Feature: gene Location: 37226-37954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ssb (COG0629), RVT-GII, HNHc (smart00507), Cyt_C5_DNA_methylase (cl30459), GIIM (pfam08388), RAYT (COG1943), DUF4145 (pfam13643), DEXHc_Mot1 (cd17999), Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase )
RVT_N (pfam13655)