myRT

myRT report for GCA_902832235.1_ASM90283223v1

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Seq: CADFAR010000006.1 TPA_asm: Burkholderia gladioli strain BCC1829 genome assembly, contig: Burkholderia_gladioli_BCC1829_NODE_6_length_373224_cov_11.4872_pilon, whole genome shotgun sequence (373224 bp)
Overview 1 RT 1: 116078-120870 bp Neighborhood of RT #1 [116078, 121049] T5orf172 HTH_XRE RVT-Retrons Trypsin_2 PAAR_CT_2 COG4253 VRR_NUC Feature: gene Location: 116078-116953 bp Feature: domain Description: T5orf172 Location: 116087-116339 bp Feature: domain Description: T5orf1 72 Location: 1 1 6087-1 1 6339 bp Feature: gene Location: 117175-117510 bp Feature: domain Description: HTH_XRE Location: 117193-117364 bp Feature: domain Description: HTH_XRE Location: 1 1 71 93-1 1 7364 bp Feature: gene Location: 117696-119621 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117870-118476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 7870-1 1 8476 bp Feature: domain Description: Trypsin_2 Location: 118950-119433 bp Feature: domain Description: Trypsin_2 Location: 1 1 8950-1 1 9433 bp Feature: gene Location: 119791-120312 bp Feature: domain Description: PAAR_CT_2 Location: 119806-120034 bp Feature: domain Description: PAAR_CT_2 Location: 1 1 9806-1 20034 bp Feature: domain Description: COG4253 Location: 120100-120253 bp Feature: domain Description: COG4253 Location: 1 201 00-1 20253 bp Feature: gene Location: 120309-121049 bp Feature: domain Description: VRR_NUC Location: 120558-120870 bp Feature: domain Description: VRR_NUC Location: 1 20558-1 20870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T5orf172 (smart00974), HTH_XRE (smart00530), RVT-Retrons, Trypsin_2 (pfam13365), PAAR_CT_2 (cd14744), COG4253 (Uncharacterized conserved protein, DUF2345 family ), VRR_NUC (smart00990)

Seq: CADFAR010000009.1 TPA_asm: Burkholderia gladioli strain BCC1829 genome assembly, contig: Burkholderia_gladioli_BCC1829_NODE_9_length_332508_cov_11.3443_pilon, whole genome shotgun sequence (332508 bp)
Overview 1 RT 1: 205080-209434 bp Neighborhood of RT #1 [205080, 209434] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 205080-205544 bp Feature: domain Description: DUF1566 Location: 205293-205521 bp Feature: domain Description: DUF1566 Location: 2 052 93-2 0552 1 bp Feature: gene Location: 205559-205936 bp Feature: domain Description: Avd_like Location: 205586-205892 bp Feature: domain Description: Avd_like Location: 2 05586-2 05892 bp Feature: gene Location: 205983-207272 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 206352-207039 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 06352 -2 07039 bp Feature: gene Location: 207280-208422 bp Feature: gene Location: 208940-209434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs