myRT

myRT report for GCA_902832885.1_Burkholderia_seminalis_LMG_24067

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Seq: CADFDK010000003.1 TPA_asm: Burkholderia seminalis strain LMG 24067 genome assembly, contig: B_seminalis_BCC1627_ERS784889_SC_contig000003, whole genome shotgun sequence (826882 bp)
Overview 1 RT 1: 713790-719371 bp Neighborhood of RT #1 [713790, 719406] MFS_MucK Histone_HNS RVT-Retrons FIN dTDP_HR_like_SDR_e Feature: gene Location: 713790-715025 bp Feature: domain Description: MFS_MucK Location: 713868-715002 bp Feature: domain Description: MFS_MucK Location: 71 3868-71 5002 bp Feature: gene Location: 715310-715639 bp Feature: domain Description: Histone_HNS Location: 715331-715568 bp Feature: domain Description: Histone_HNS Location: 71 5331 -71 5568 bp Feature: gene Location: 715953-717302 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 716418-717054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71 641 8-71 7054 bp Feature: gene Location: 717601-718173 bp Feature: domain Description: FIN Location: 717778-718138 bp Feature: domain Description: FIN Location: 71 7778-71 81 38 bp Feature: gene Location: 718441-719406 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 718480-719371 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 71 8480-71 9371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), dTDP_HR_like_SDR_e (cd05254)

Seq: CADFDK010000004.1 TPA_asm: Burkholderia seminalis strain LMG 24067 genome assembly, contig: B_seminalis_BCC1627_ERS784889_SC_contig000004, whole genome shotgun sequence (630658 bp)
Overview 1 RT 1: 624714-630262 bp Neighborhood of RT #1 [624714, 630312] InsE RVT-GII LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 624714-625151 bp Feature: gene Location: 626047-626433 bp Feature: domain Description: InsE Location: 626080-626284 bp Feature: domain Description: InsE Location: 62 6080-62 62 84 bp Feature: gene Location: 627093-627557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627504-627555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 7504-62 7555 bp Feature: gene Location: 628744-629079 bp Feature: domain Description: LZ_Tnp_IS66 Location: 628870-629077 bp Feature: domain Description: LZ_Tnp_IS66 Location: 62 8870-62 9077 bp Feature: gene Location: 629236-630312 bp Feature: domain Description: DDE_Tnp_IS66 Location: 629275-630130 bp Feature: domain Description: DDE_Tnp_IS66 Location: 62 92 75-630130 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 630151-630262 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 630151-6302 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)