myRT

myRT report for GCA_902832955.1_ASM90283295v1

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Seq: CADFDO010000002.1 TPA_asm: Burkholderia sp. BCC0044 genome assembly, contig: B_cepacia_complex_BCC0044_ERS785043_SC_contig000002, whole genome shotgun sequence (1886750 bp)
Overview 1 RT 1: 1809379-1815138 bp Neighborhood of RT #1 [1809379, 1815138] Phage_int_SAM_2 INT_Rci_Hp1_C HTH_8 RVT-GII GIIM Lar_restr_allev Feature: gene Location: 1809379-1810521 bp Feature: domain Description: Phage_int_SAM_2 Location: 1809520-1809739 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 809520-1 809739 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1809853-1810225 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 809853-1 81 0225 bp Feature: domain Description: HTH_8 Location: 1810417-1810492 bp Feature: domain Description: HTH_8 Location: 1 81 041 7-1 81 0492 bp Feature: gene Location: 1810610-1810888 bp Feature: gene Location: 1811906-1813195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1812146-1812764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 21 46-1 81 2764 bp Feature: domain Description: GIIM Note: maturase Location: 1812815-1813019 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 281 5-1 81 301 9 bp Feature: gene Location: 1813937-1814608 bp Feature: domain Description: Lar_restr_allev Location: 1813946-1814231 bp Feature: domain Description: Lar_restr_allev Location: 1 81 3946-1 81 4231 bp Feature: gene Location: 1814719-1815138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), INT_Rci_Hp1_C (cd00796), HTH_8 (pfam02954), RVT-GII, GIIM (pfam08388), Lar_restr_allev (pfam14354)

Seq: CADFDO010000004.1 TPA_asm: Burkholderia sp. BCC0044 genome assembly, contig: B_cepacia_complex_BCC0044_ERS785043_SC_contig000004, whole genome shotgun sequence (1155499 bp)
Overview 1 RT 1: 125930-131203 bp Neighborhood of RT #1 [125930, 131226] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 125930-126685 bp Feature: domain Description: his_ut_repres Location: 126008-126680 bp Feature: domain Description: his_ut_repres Location: 12 6008-12 6680 bp Feature: gene Location: 126891-127463 bp Feature: domain Description: FIN Location: 127074-127425 bp Feature: domain Description: FIN Location: 12 7074-12 742 5 bp Feature: gene Location: 127717-129066 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128182-128818 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 8182 -12 8818 bp Feature: gene Location: 129343-129693 bp Feature: domain Description: Histone_HNS Location: 129385-129622 bp Feature: domain Description: Histone_HNS Location: 12 9385-12 962 2 bp Feature: gene Location: 129979-131226 bp Feature: domain Description: MFS_MucK Location: 130069-131203 bp Feature: domain Description: MFS_MucK Location: 130069-1312 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)