myRT

myRT report for GCA_902833035.1_ASM90283303v1

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Seq: CADFDW010000014.1 TPA_asm: Burkholderia seminalis strain BCC1628 genome assembly, contig: B_seminalis_BCC1628_ERS784906_SC_contig000014, whole genome shotgun sequence (237363 bp)
Overview 1 RT 1: 124043-129638 bp Neighborhood of RT #1 [124043, 129661] dTDP_HR_like_SDR_e FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 124043-125008 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 124082-124973 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 1 24082-1 24973 bp Feature: gene Location: 125113-125850 bp Feature: domain Description: FIN Location: 125455-125815 bp Feature: domain Description: FIN Location: 1 25455-1 2581 5 bp Feature: gene Location: 126149-127498 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126614-127250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2661 4-1 27250 bp Feature: gene Location: 127791-128141 bp Feature: domain Description: Histone_HNS Location: 127833-128070 bp Feature: domain Description: Histone_HNS Location: 1 27833-1 28070 bp Feature: gene Location: 128426-129661 bp Feature: domain Description: MFS_MucK Location: 128504-129638 bp Feature: domain Description: MFS_MucK Location: 1 28504-1 29638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_HR_like_SDR_e (cd05254), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADFDW010000036.1 TPA_asm: Burkholderia seminalis strain BCC1628 genome assembly, contig: B_seminalis_BCC1628_ERS784906_SC_contig000036, whole genome shotgun sequence (22795 bp)
Overview 1 RT 1: 19621-22697 bp Neighborhood of RT #1 [19621, 22697] DDE_Tnp_IS66_C DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 19621-19770 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19639-19720 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19639-1972 0 bp Feature: gene Location: 20259-20537 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20283-20367 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 02 83-2 0367 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 20385-20496 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 0385-2 0496 bp Feature: gene Location: 21023-22351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21314-21977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1314-2 1977 bp Feature: domain Description: GIIM Note: maturase Location: 22043-22265 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 043-2 2 2 65 bp Feature: gene Location: 22371-22697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)