myRT

myRT report for GCA_902833175.1_ASM90283317v1

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Seq: CADFED010000003.1 TPA_asm: Burkholderia sp. BCC0801 genome assembly, contig: B_cenocepacia_BCC0801_ERS784873_SC_contig000003, whole genome shotgun sequence (627303 bp)
Overview 1 RT 1: 157833-164985 bp Neighborhood of RT #1 [157833, 165032] PspA MrcA RVT-GII GIIM DUF3574 Thr-dehyd Feature: gene Location: 157833-158513 bp Feature: domain Description: PspA Location: 157836-158502 bp Feature: domain Description: PspA Location: 1 57836-1 58502 bp Feature: gene Location: 158957-161473 bp Feature: domain Description: MrcA Location: 159125-161288 bp Feature: domain Description: MrcA Location: 1 591 25-1 61 288 bp Feature: gene Location: 161907-163277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162243-162858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 62243-1 62858 bp Feature: domain Description: GIIM Note: maturase Location: 162918-163119 bp Feature: domain Description: GIIM Note: maturase Location: 1 6291 8-1 631 1 9 bp Feature: gene Location: 163397-163807 bp Feature: domain Description: DUF3574 Location: 163499-163805 bp Feature: domain Description: DUF3574 Location: 1 63499-1 63805 bp Feature: gene Location: 163977-165032 bp Feature: domain Description: Thr-dehyd Location: 164079-164985 bp Feature: domain Description: Thr-dehyd Location: 1 64079-1 64985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PspA (COG1842), MrcA (COG5009), RVT-GII, GIIM (pfam08388), DUF3574 (pfam12098), Thr-dehyd (cd01562)

Seq: CADFED010000011.1 TPA_asm: Burkholderia sp. BCC0801 genome assembly, contig: B_cenocepacia_BCC0801_ERS784873_SC_contig000011, whole genome shotgun sequence (228343 bp)
Overview 1 RT 1: 124296-130473 bp Neighborhood of RT #1 [124296, 130496] HutH his_ut_repres RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 124296-125789 bp Feature: domain Description: HutH Location: 124308-125763 bp Feature: domain Description: HutH Location: 12 4308-12 5763 bp Feature: gene Location: 125840-126595 bp Feature: domain Description: his_ut_repres Location: 125918-126590 bp Feature: domain Description: his_ut_repres Location: 12 5918-12 6590 bp Feature: gene Location: 126892-128313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127429-128065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 742 9-12 8065 bp Feature: gene Location: 128618-128968 bp Feature: domain Description: Histone_HNS Location: 128660-128897 bp Feature: domain Description: Histone_HNS Location: 12 8660-12 8897 bp Feature: gene Location: 129249-130496 bp Feature: domain Description: MFS_MucK Location: 129339-130473 bp Feature: domain Description: MFS_MucK Location: 12 9339-130473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HutH (COG2986), his_ut_repres (TIGR02018), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CADFED010000019.1 TPA_asm: Burkholderia sp. BCC0801 genome assembly, contig: B_cenocepacia_BCC0801_ERS784873_SC_contig000019, whole genome shotgun sequence (137570 bp)
Overview 1 RT 1: 424-4925 bp Neighborhood of RT #1 [424, 5002] RVT-UG5 Met_dep_hydrolase_A Feature: gene Location: 424-2877 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 427-829 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 427-829 bp Feature: gene Location: 3207-3560 bp Feature: gene Location: 3761-5002 bp Feature: domain Description: Met_dep_hydrolase_A Location: 3896-4925 bp Feature: domain Description: Met_dep_hydrolase_A Location: 3 896-4925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Met_dep_hydrolase_A (cd01299)